| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Lreu_0186 |
|---|
| Symbol | |
|---|
| ID | 5189830 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Lactobacillus reuteri DSM 20016 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009513 |
|---|
| Strand | + |
|---|
| Start bp | 219219 |
|---|
| End bp | 219989 |
|---|
| Gene Length | 771 bp |
|---|
| Protein Length | 256 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 40% |
|---|
| IMG OID | 640589981 |
|---|
| Product | ABC transporter related |
|---|
| Protein accession | YP_001270793 |
|---|
| Protein GI | 148543423 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG1125] ABC-type proline/glycine betaine transport systems, ATPase components |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 63 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGACAGAAC CAATTATTCA ATTTAAGCAT GTTGAGAAGC GTTTTAACGA TCAAACAGTG
ATTCCTGATC TCAATTTCAC AGTCAACAAG GGTGAATTTA TAACAATTCT TGGTTCATCT
GGCTCAGGGA AAACTACTAC CTTGAAAATG ATCAACGGGC TGATAACGCC AAGCGCTGGT
GAAATATTAA TTGATGGACA AAAACTTCGA GACCTTGATC TGGTAAAATT GCGTCGGCAC
ATGGGATATG TTGTCCAACA GATCGGATTA TTCCCTCATA TGACGATTGG ACAAAATATT
GCAGTTGTGC CCAAAATGCT GCATTGGGAT AAGAAAGAGA TTAATAATCG TGTTAAAGAA
TTACTAAGTC TTGTTCAACT AAATCCCGCT GAATATATGA ATCGCTATCC TCAACAATTA
TCTGGGGGCC AACAACAACG CGTAGGAGTG GCAAGAGCTT TAGCGACTAA TCCACCGTAT
GTATTATTTG ATGAACCTTT TGGCGCGCTG GATGCCTTAA CAAGAATGGA ATTGCAACGA
GAAGTGAAAA AGATTCATGA ATCATTGGCA GAAAAGACTT TTATGTTTGT AACCCATGAT
ATTAACGAAG CCTTATTTTT AGGCCAGCGA GTGATGATCA TGCATGAAGG ACGCATCGTT
CAATTTGCTA CGCCAGAAGA AATTGTTCGC CATCCAGCAA CGGAATTTGT TGAGCAGCTT
TTAGGAACGA TTCGCCAAAA TCAAGATTTG TGGAGGCAAC AATATGAGTG A
|
|---|
| Protein sequence | MTEPIIQFKH VEKRFNDQTV IPDLNFTVNK GEFITILGSS GSGKTTTLKM INGLITPSAG
EILIDGQKLR DLDLVKLRRH MGYVVQQIGL FPHMTIGQNI AVVPKMLHWD KKEINNRVKE
LLSLVQLNPA EYMNRYPQQL SGGQQQRVGV ARALATNPPY VLFDEPFGAL DALTRMELQR
EVKKIHESLA EKTFMFVTHD INEALFLGQR VMIMHEGRIV QFATPEEIVR HPATEFVEQL
LGTIRQNQDL WRQQYE
|
|---|
| |