Gene Lreu_0142 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagLreu_0142 
Symbol 
ID5190126 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameLactobacillus reuteri DSM 20016 
KingdomBacteria 
Replicon accessionNC_009513 
Strand
Start bp169146 
End bp170183 
Gene Length1038 bp 
Protein Length345 aa 
Translation table11 
GC content44% 
IMG OID640589934 
Productphosphoribosylaminoimidazole synthetase 
Protein accessionYP_001270751 
Protein GI148543381 
COG category[F] Nucleotide transport and metabolism 
COG ID[COG0150] Phosphoribosylaminoimidazole (AIR) synthetase 
TIGRFAM ID[TIGR00878] phosphoribosylaminoimidazole synthetase 


Plasmid Coverage information

Num covering plasmid clones38 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGTCGTT ATCAAGATGC AGGGGTAGAT GTAAATGCCG GGTACGAACT TGTTCACCGT 
ATTAAAGATG CAGTCAAATC AACTGATCGC CCAGGTGTGA TTGGGGGAAT TGGCAGCTTT
GGGGGGATGT TTGACTTAGA AAAATTACAG GTGCAGCATC CAATTCTTGT CTCTGGTACT
GACGGTGTAG GTACGAAACT CTTAATTGCT CAACAAATGA ATAAGCACGA TACAATCGGG
ATCGATGTTG TCGCAATGTG CGTTAATGAT GTCCTGGCGC AGGGAGCGGA ACCAATAACA
TTTCTCGACT ATATTGCGAC CGGCCATAAT GATCCGGCTA AGATGGCAGC GATTGTTAGT
GGAGTAGCAA CTGGTTGCCG AGAAGCTGGA GCCGCTTTAA TTGGTGGAGA AACAGCAGAG
ATGCCAGATA TGTATGCAGC CAATGAGTAT GACCTAGCAG GAACAGTAAC AGGGATAGCA
GAAAAAGAAG AACTTCTTAC CACTGCTGGA CCACAAAAAG GTGATATCTT GCTTGGACTC
CCATCAAGCG GCTTGCATTC CAATGGCTTT TCCCTTGTCC GGCAGATCTT ATTTAAGGAT
AATCACGTCA AATTAACTGA TCGCCCAGAA GCATTGAGAG GAAAGACGGT AGGAGAAACG
ATCCTAACTC CTACTAGGAT TTATGTTCAA GCGGTTTTAC CACTAGTACA TCGCAAATTG
GTTCATGGGA TTAGCCATAT TACTGGTGGA GGATTGATTG AAAATGTTCC CCGAATGTTA
GGAGATAACT TGCAAGCGGT GATTGATCCT GGTCGGTGGC CACAGCTTCC AGTCTTTGAC
TATTTGCGGG TGCTAGGAGG CCTTACTAAG GAGGATTGTT TCGAAGCATT TAACATGGGA
ATAGGAATGG TCTTAGCAGT AGCACCAGAT CAAGTAGCAC AAGTTCAAGA GATACTATCA
AATAAAAACA TGACAAGTTA TCAAATTGGT TATCTTCGTC ATTGTTTGCC AGATACAAAA
AAGATTGTTA TCAAGTGA
 
Protein sequence
MSRYQDAGVD VNAGYELVHR IKDAVKSTDR PGVIGGIGSF GGMFDLEKLQ VQHPILVSGT 
DGVGTKLLIA QQMNKHDTIG IDVVAMCVND VLAQGAEPIT FLDYIATGHN DPAKMAAIVS
GVATGCREAG AALIGGETAE MPDMYAANEY DLAGTVTGIA EKEELLTTAG PQKGDILLGL
PSSGLHSNGF SLVRQILFKD NHVKLTDRPE ALRGKTVGET ILTPTRIYVQ AVLPLVHRKL
VHGISHITGG GLIENVPRML GDNLQAVIDP GRWPQLPVFD YLRVLGGLTK EDCFEAFNMG
IGMVLAVAPD QVAQVQEILS NKNMTSYQIG YLRHCLPDTK KIVIK