Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Lreu_0134 |
Symbol | |
ID | 5189258 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Lactobacillus reuteri DSM 20016 |
Kingdom | Bacteria |
Replicon accession | NC_009513 |
Strand | + |
Start bp | 160637 |
End bp | 161122 |
Gene Length | 486 bp |
Protein Length | 161 aa |
Translation table | 11 |
GC content | 43% |
IMG OID | 640589926 |
Product | phosphoribosylaminoimidazole carboxylase, catalytic subunit |
Protein accession | YP_001270743 |
Protein GI | 148543373 |
COG category | [F] Nucleotide transport and metabolism |
COG ID | [COG0041] Phosphoribosylcarboxyaminoimidazole (NCAIR) mutase |
TIGRFAM ID | [TIGR01162] phosphoribosylaminoimidazole carboxylase, PurE protein |
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Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 0.00281545 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAGTGATA TTAGTGTCGT GATGGGCAGT AAATCAGACT GGCCAACTGT TAAAGAAACT TGTGATATTT TAGATGAATT TGGTGTTTCA TATGAAAAGA ATGTGATTTC TGCTCATCGG ATGCCAAATG AAATGTTCGC GTTTGCGCAA AATGCGGTTG ATAATGGGGT TAAAGTAATT ATTGCATGTG CTGGGGGAGC AGCTCATCTT CCCGGAATGA TTGCGGCAAA TACCCCCCTG CCAGTAATTG GGATCCCAGG ACAGACAAAA GCTCTTGGTG GCATGGACTC GCTTTTATCA ATTGTTCAAA TGCCAGCGGG AATTCCGGTG GCAACCACTG CGATTGGAAA AGCAGGCGCT AAAAATGCAG CGTTATTAGC ATTGCAAATT CTGGGGATCA CAGATAAGCA TATCCAACAA CAAATCATCG AATATCGACA GGCGATGCAT GATCAAGCAA AAGAAAGTGG GCAGTATCTT GAATAA
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Protein sequence | MSDISVVMGS KSDWPTVKET CDILDEFGVS YEKNVISAHR MPNEMFAFAQ NAVDNGVKVI IACAGGAAHL PGMIAANTPL PVIGIPGQTK ALGGMDSLLS IVQMPAGIPV ATTAIGKAGA KNAALLALQI LGITDKHIQQ QIIEYRQAMH DQAKESGQYL E
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