Gene Lreu_0127 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagLreu_0127 
Symbol 
ID5189454 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameLactobacillus reuteri DSM 20016 
KingdomBacteria 
Replicon accessionNC_009513 
Strand+ 
Start bp152139 
End bp152780 
Gene Length642 bp 
Protein Length213 aa 
Translation table11 
GC content42% 
IMG OID640589919 
Productorotate phosphoribosyltransferase 
Protein accessionYP_001270736 
Protein GI148543366 
COG category[F] Nucleotide transport and metabolism 
COG ID[COG0461] Orotate phosphoribosyltransferase 
TIGRFAM ID[TIGR00336] orotate phosphoribosyltransferase 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value0.00677892 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACATATT CACAACGCGT TGCAAAGGCA TTATTAGATA TTCATGCTGT TACCCTTAAC 
CCAGACCAAC CATTTACCTG GGCAAGTGGT CTAAAATCCC CAATCTATAC CGATAATCGA 
TTGACGATTT CTTATCCAGA AGTTCGGCAA GCAATTTTTA ATGGGATGGT TGAACAAATT 
AAACTCCATT TTAGTGCGGC CGATGTTATT GCCGGGACAG CAACTGCTGG GATTCCTCAT 
GCGGCATGGG TTGCTCAGAA TATGGAATTA CCGATGATTT ATGTTCGGAC TAAACCGAAA 
GATCATGGTC AAGGCAAGCA AATTGAAGGG GTGCTTAAAG AAGGACAAAA AGTCGTCGTG 
ATTGATGACC TTATTTCAAC TGGTGGCAGT GTACTAAATG CTGTGCGGGC GGTTAACAAT 
GCAGGCGGAA AAGTAATTGG CGTTGTTTCT GTCTTTACTT ATGATTTGCC GGCTGCCGAA 
CAAAACTTTA TGGCAAATGG GCTGAAGTAC TATTCAGTAA CGGATTATAT GACTTTGATT 
AAGGTGGCCA AGGAAAATAA CCAAATTAGT ACAGACCACC TCAAATCCCT TCAAGAATGG 
CGAAAAGACC CGTTAAGCTG GAGCAAAGAG CAAGCATCAT AA
 
Protein sequence
MTYSQRVAKA LLDIHAVTLN PDQPFTWASG LKSPIYTDNR LTISYPEVRQ AIFNGMVEQI 
KLHFSAADVI AGTATAGIPH AAWVAQNMEL PMIYVRTKPK DHGQGKQIEG VLKEGQKVVV 
IDDLISTGGS VLNAVRAVNN AGGKVIGVVS VFTYDLPAAE QNFMANGLKY YSVTDYMTLI 
KVAKENNQIS TDHLKSLQEW RKDPLSWSKE QAS