Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Lreu_0115 |
Symbol | |
ID | 5189782 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Lactobacillus reuteri DSM 20016 |
Kingdom | Bacteria |
Replicon accession | NC_009513 |
Strand | + |
Start bp | 141343 |
End bp | 142275 |
Gene Length | 933 bp |
Protein Length | 310 aa |
Translation table | 11 |
GC content | 38% |
IMG OID | 640589907 |
Product | DeoR family transcriptional regulator |
Protein accession | YP_001270724 |
Protein GI | 148543354 |
COG category | [K] Transcription |
COG ID | [COG2390] Transcriptional regulator, contains sigma factor-related N-terminal domain |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 2 |
Plasmid unclonability p-value | 0.000000000156303 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGGATGATA AAAATAAGAT TGAATTAGCG CTAAAAGTAG CAACCTTATA TTATCGTGAT GGATGGAACC AAAGCGATAT TGCAACTGAA CTAAATATTT CCCGGGCAAC AGTGTCACGA TTATTACAAT TTGGTCGGGA TCGAGGATTA GTAACCATTA AAATTCATAA TCCAGTTGCT CCGCTTCACC AGTTGGAAGT GGACTTGCTC GCTAAATATC CATCATTGCA TAAAATTATT ATTGTTCCAG GCACGGATGA TCCACTTGAA GAAGTTGGTG CAGCGGGTGC TAAATATATC GAACAAGTCG TAGAAGATAA AGATATTATT GGATTAGGCT GGGGAAAAAC CGTCTATCAA GTAGGATTGC ATTTGAAACC TAAAGACGTT ACTGATATTA CTGTTGTTCA AATGAAAGGC AGTATGGCAA ATACTAATAC GCGAAATTAT GCGTTTGAAA CGGTTAATAT CTTTGCGAAT GCTTTTAATA CCGTTCCCCA GTATTTGCCG TTACCAGTTA TCTTTGATCA TGCAAAGACA CGTGAATTAG TTGCTAATGA TACCCACATC AAACATATTT TGAAATTAGG GGAGCAGTCT AATATCGCTG TTTTCACAGT GGGAACAGTA CGTGACTCAG CATTGTTATT TAAATTAGGT TACTTCACCA AGCAGGAGCA ATTAACATTA CAACATGAGG CGGTAGGGGA TGTTTTCTCT CGTTTCATTG ATAGTAAGGG TCAGATAGTA AATGAAGATA TCAATCAACG AACAATTGGA ATTGCACTTC CTGAGTTGCA AAAGAAAAAA CACAGCATTT TAGTGGCGGC AAATGTTGCT AAAGTACCAG CAGTACATGG TGTTTTGAGT GCTGGGTATG CGAATACATT GGTTATTGAT CAAGAGAGTG CAAATAGTCT AGTTGATTTT TAA
|
Protein sequence | MDDKNKIELA LKVATLYYRD GWNQSDIATE LNISRATVSR LLQFGRDRGL VTIKIHNPVA PLHQLEVDLL AKYPSLHKII IVPGTDDPLE EVGAAGAKYI EQVVEDKDII GLGWGKTVYQ VGLHLKPKDV TDITVVQMKG SMANTNTRNY AFETVNIFAN AFNTVPQYLP LPVIFDHAKT RELVANDTHI KHILKLGEQS NIAVFTVGTV RDSALLFKLG YFTKQEQLTL QHEAVGDVFS RFIDSKGQIV NEDINQRTIG IALPELQKKK HSILVAANVA KVPAVHGVLS AGYANTLVID QESANSLVDF
|
| |