| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Lreu_0104 |
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| Symbol | gidB |
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| ID | 5189774 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Lactobacillus reuteri DSM 20016 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009513 |
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| Strand | + |
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| Start bp | 131482 |
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| End bp | 132207 |
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| Gene Length | 726 bp |
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| Protein Length | 241 aa |
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| Translation table | 11 |
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| GC content | 41% |
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| IMG OID | 640589896 |
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| Product | 16S rRNA methyltransferase GidB |
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| Protein accession | YP_001270713 |
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| Protein GI | 148543343 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0357] Predicted S-adenosylmethionine-dependent methyltransferase involved in bacterial cell division |
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| TIGRFAM ID | [TIGR00138] 16S rRNA methyltransferase GidB |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 4 |
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| Plasmid unclonability p-value | 0.00000000826958 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGAATCCTG AACAATTTCA ACAAGCATTA GCTGATCATG GTATTACCTT ATCAGCAGAA
CAAATGCAAC AATTTGCTGA CTATTACCAA TTATTAGTTG AAACTAATGA ACATGTAAAT
TTGACACGGA TTACTGAAAA GAATGAAGTG TATTTAAAAC ATTTTTATGA CTCAATTACA
GGAGCGTTTG CTGAACCACG CTTAGAGAGT GAAGACCTGA CATTATGTGA TATCGGTGCT
GGGGCCGGCT TTCCTTCCTT ACCGTTGAAG ATCGCTTTTC CACAGTTAAA GGTAACGATT
GTCGATTCGT TAAATAAGCG GATTGCTTTT CTTGAAGACT TAGTTGCCAA GCTCGGGTTA
ACCGGTGTTA CATTGATTCA TGATCGGGCA GAGACTTTTA GTGCTAAGAC CAGTCCATAT
CGGGAGAAAT TCGATATTGT TACCGCCCGC GCAGTTGCCC GCCTATCGGT TTTGAGCGAA
TTATGCTTGC CAGCTGCTAA AGTTGGTGGG GAATTTATTG CTTATAAGGC AAGTGCTGCT
CCCGAAGAAC TCCAACAAGG TGGAACAGCA ATCAAACAGC TTGGTGGAAA AGTTCAAAAA
ACGGTGACAT TGACTTTACC GGGAACTGAT GAAGAACGCA ATATTATTGT TATTGATAAG
ATAAAGGCGA CCCCTAAGAA ATATCCACGT CGTCCTGGCT TACCAAGTAA AAAACCAATT
CAATAA
|
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| Protein sequence | MNPEQFQQAL ADHGITLSAE QMQQFADYYQ LLVETNEHVN LTRITEKNEV YLKHFYDSIT
GAFAEPRLES EDLTLCDIGA GAGFPSLPLK IAFPQLKVTI VDSLNKRIAF LEDLVAKLGL
TGVTLIHDRA ETFSAKTSPY REKFDIVTAR AVARLSVLSE LCLPAAKVGG EFIAYKASAA
PEELQQGGTA IKQLGGKVQK TVTLTLPGTD EERNIIVIDK IKATPKKYPR RPGLPSKKPI
Q
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