Gene Lreu_0088 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagLreu_0088 
Symbol 
ID5189732 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameLactobacillus reuteri DSM 20016 
KingdomBacteria 
Replicon accessionNC_009513 
Strand
Start bp108608 
End bp109618 
Gene Length1011 bp 
Protein Length336 aa 
Translation table11 
GC content43% 
IMG OID640589883 
ProductLacI family transcription regulator 
Protein accessionYP_001270700 
Protein GI148543330 
COG category[K] Transcription 
COG ID[COG1609] Transcriptional regulators 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.00000000000127052 
Plasmid hitchhikingNo 
Plasmid clonabilityunclonable 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAGCCAA CAATTAAAGA TATTGCTCAA CGGGCCCATG TTTCAACGGC CACCGTTTCT 
CGTGTTTTAT CCAAAAAAGC GAAATCCTAC CGTCCCGAAA CTGCGGCTAA GATTGAAGCA
ATCGCTAAAG AACTAGGATA CAAGAAAAAC CTCGCAGCGG CTGAATTAGC TGCCAACAGC
AGTATGTTAA TTGCCGTCAT CTTAAATAAT ACTCAAACGA ATTTTTCAAA TGATATCATC
GCTGCTATTC AAGCAGAAAC AGATAAAGCT GGTTACCAAA TGTTTATTCT TTACGCCGGG
AACCATGATG CCCGACTGCT TAATCAAGCA ATTAGCGTTG CCCTCGAACG ACACGTTGCC
GGTATTCTGC TAGTCGCAAC TTCCCTCGAT GAACAAGCCG CTCGCACCCT ACGAGAAAGT
AATACTCCTT GCCGGTTAGT ATCGGTCTAT GATGAAGATG ATCCCCGGTA TACTGGATTT
AAATTTACAA GTTCAAATAA CGAGGAAATT GGTTATTCAG CCGCTAACTA TTTAATTGAA
CGCGGACACT CCCGAATTGG ATTAGCCGGC ATTGATCGTT CTTCAACTGG AAAGCAGCGA
CTTCATGGCT ACCAACGGTC ACTGACTGAA CACGGCTTGA TTCCTCATAT GGAATGGGTT
GAATATGGCG ATTACAGTTT TGGTCCTCAA CAAAACATGC TCAAAACACT AATGAATAAG
GATCTTGACG CGATCATCAC AGCTAGTGAT ATGGTGGCCG TGGGCATGAT CAGAGAGGCT
CATTTACTAG GCCTTGATAT TCCGAAAGAC CTATCATTTA TTAGTATCGA TGGGACTTTT
CTCTGTGATA TCACCATTCC AACTATTACA AGCGTAACCC AGGACTTTTA TCAAATGGGA
CTCATTGCAG TTAGGAGCCT ATTGAACGAT GATGACTCAC AATTTATCCC AGTCCATATC
ACACCGCGAA ATAGCGTAAG ACTCCTAAGC GAAAAATCAT TAGAATATTA G
 
Protein sequence
MKPTIKDIAQ RAHVSTATVS RVLSKKAKSY RPETAAKIEA IAKELGYKKN LAAAELAANS 
SMLIAVILNN TQTNFSNDII AAIQAETDKA GYQMFILYAG NHDARLLNQA ISVALERHVA
GILLVATSLD EQAARTLRES NTPCRLVSVY DEDDPRYTGF KFTSSNNEEI GYSAANYLIE
RGHSRIGLAG IDRSSTGKQR LHGYQRSLTE HGLIPHMEWV EYGDYSFGPQ QNMLKTLMNK
DLDAIITASD MVAVGMIREA HLLGLDIPKD LSFISIDGTF LCDITIPTIT SVTQDFYQMG
LIAVRSLLND DDSQFIPVHI TPRNSVRLLS EKSLEY