Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Lreu_0088 |
Symbol | |
ID | 5189732 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Lactobacillus reuteri DSM 20016 |
Kingdom | Bacteria |
Replicon accession | NC_009513 |
Strand | - |
Start bp | 108608 |
End bp | 109618 |
Gene Length | 1011 bp |
Protein Length | 336 aa |
Translation table | 11 |
GC content | 43% |
IMG OID | 640589883 |
Product | LacI family transcription regulator |
Protein accession | YP_001270700 |
Protein GI | 148543330 |
COG category | [K] Transcription |
COG ID | [COG1609] Transcriptional regulators |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 0 |
Plasmid unclonability p-value | 0.00000000000127052 |
Plasmid hitchhiking | No |
Plasmid clonability | unclonable |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAAGCCAA CAATTAAAGA TATTGCTCAA CGGGCCCATG TTTCAACGGC CACCGTTTCT CGTGTTTTAT CCAAAAAAGC GAAATCCTAC CGTCCCGAAA CTGCGGCTAA GATTGAAGCA ATCGCTAAAG AACTAGGATA CAAGAAAAAC CTCGCAGCGG CTGAATTAGC TGCCAACAGC AGTATGTTAA TTGCCGTCAT CTTAAATAAT ACTCAAACGA ATTTTTCAAA TGATATCATC GCTGCTATTC AAGCAGAAAC AGATAAAGCT GGTTACCAAA TGTTTATTCT TTACGCCGGG AACCATGATG CCCGACTGCT TAATCAAGCA ATTAGCGTTG CCCTCGAACG ACACGTTGCC GGTATTCTGC TAGTCGCAAC TTCCCTCGAT GAACAAGCCG CTCGCACCCT ACGAGAAAGT AATACTCCTT GCCGGTTAGT ATCGGTCTAT GATGAAGATG ATCCCCGGTA TACTGGATTT AAATTTACAA GTTCAAATAA CGAGGAAATT GGTTATTCAG CCGCTAACTA TTTAATTGAA CGCGGACACT CCCGAATTGG ATTAGCCGGC ATTGATCGTT CTTCAACTGG AAAGCAGCGA CTTCATGGCT ACCAACGGTC ACTGACTGAA CACGGCTTGA TTCCTCATAT GGAATGGGTT GAATATGGCG ATTACAGTTT TGGTCCTCAA CAAAACATGC TCAAAACACT AATGAATAAG GATCTTGACG CGATCATCAC AGCTAGTGAT ATGGTGGCCG TGGGCATGAT CAGAGAGGCT CATTTACTAG GCCTTGATAT TCCGAAAGAC CTATCATTTA TTAGTATCGA TGGGACTTTT CTCTGTGATA TCACCATTCC AACTATTACA AGCGTAACCC AGGACTTTTA TCAAATGGGA CTCATTGCAG TTAGGAGCCT ATTGAACGAT GATGACTCAC AATTTATCCC AGTCCATATC ACACCGCGAA ATAGCGTAAG ACTCCTAAGC GAAAAATCAT TAGAATATTA G
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Protein sequence | MKPTIKDIAQ RAHVSTATVS RVLSKKAKSY RPETAAKIEA IAKELGYKKN LAAAELAANS SMLIAVILNN TQTNFSNDII AAIQAETDKA GYQMFILYAG NHDARLLNQA ISVALERHVA GILLVATSLD EQAARTLRES NTPCRLVSVY DEDDPRYTGF KFTSSNNEEI GYSAANYLIE RGHSRIGLAG IDRSSTGKQR LHGYQRSLTE HGLIPHMEWV EYGDYSFGPQ QNMLKTLMNK DLDAIITASD MVAVGMIREA HLLGLDIPKD LSFISIDGTF LCDITIPTIT SVTQDFYQMG LIAVRSLLND DDSQFIPVHI TPRNSVRLLS EKSLEY
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