| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Lreu_0083 |
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| Symbol | |
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| ID | 5189544 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Lactobacillus reuteri DSM 20016 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009513 |
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| Strand | + |
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| Start bp | 99279 |
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| End bp | 100961 |
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| Gene Length | 1683 bp |
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| Protein Length | 560 aa |
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| Translation table | 11 |
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| GC content | 39% |
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| IMG OID | 640589878 |
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| Product | alpha amylase, catalytic region |
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| Protein accession | YP_001270695 |
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| Protein GI | 148543325 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG0366] Glycosidases |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 0.0810365 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGAAAACA ATCATTGGTG GAATAAATCG GTTGTTTATC AAATTTATCC CAAAAGTTTT
CAGGATACCA ATCATGATGG TGTCGGTGAC CTTCGTGGAA TAATTGATCG TCTTGATTAC
ATTAAAAAAT TAGGCGTTGA TGTCATTTGG TTGAACCCCA TTTATGAGTC GCCACAAGTT
GATAATGGTT ATGATATTAG CAACTATGAA GCAATTAACC CAACTCTTGG CAACATGGAT
GATTTTCAAG AATTGATTGA TGGCATCCAT GAACGTGGAA TGAAATTGGT CATGGACTTA
GTTGTTAACC ATACTTCTGA CCAACATGAC TGGTTTAAGG AATCACGAAA GAGCAAAGAC
AATCCATATC GTGATTATTA TATTTGGCGT GATGGTAAGA ATGGTGAAGA GCCAAATAAT
TGGGGATCGT ATTTCTCTGG AGCTGCTTGG AAATATGATG ATGAATCCGG CCAATATTAC
CTTCATCTTT TTGCTCCAGA ACAACCAGAT CTAAATTGGG AAAATCCGAA AGTTCGGCAC
TCTGTTTATG ACATGATGAA CTGGTGGGCT GCGAAGGGTG TCGATGGGTT TCGGATGGAC
GTTATTAACC TAATTTCTAA GCCGGATGGA TTGCCAGATG CTAACAAGAA CGAAGATGAG
AAATACGCCA ATGTTGAGCC ATTAGTATCA AATGGTCACC GCATTCATGA ATTCTTACAA
GAAATGAATA AGAATGTTAT GAGTAAGCAT AAAATGGTGA CAGTTGGTGA AACACCGGGC
GCTACACCGG AAGATGCCGA GAAGTATGCC AGTCTTGATA ATAAGGAATT AAATATGATT
TTCCAGTTTG AACATATGGG CCTTGATAGT AATCCTAATC CAGCCCTTGG CAAGTGGGAT
GATCGCAAGA CGACCCTTAA AGACTTACGG GCAAACTTAA CGAAGTGGCA AGAAAAATTG
TATGGCAAGG CTTGGAACTC CCTTTATTGG AACAACCATG ATCAGCCACG CGTTGTATCA
CGTTTTGGTA ATGATCAGAC GGAAGATTAT CGAGTTAAAT CTGCCAAGAT GTTAGCGACT
ATGACCCATA TGATGCAAGG AACGCCATAT ATCTATGAAG GGGAAGAAAT TGGCATGACT
AACGCCTATT TCCCAAAGCT TGAAGATTAC GTCGACCTTG AATCGATTAA TGCCTACCAC
CAACTTGTTG ATGACCAACA TTTACTTGAT GGCAAGACAA TGATGAAGTA CATTGCAATT
CATTCTCGGG ATAATGCACG GACACCAATG CAATGGGATG ATAGCGAATA TGCAGGATTT
TCCGACCATA CCCCATGGGA AAAGGTTAAT CCAAATTACA AGCAGATTAA TGTCAAAGAT
GCATTAGCTG ATAAGAATTC AATTTTCTAT TACTATCAAA AATTGATTGA ACTACGACAC
TCAATGCAGG TAATTACTAA TGGAAAGTAT GCGTTAGTTC CTGGTAATGA AGATGATGAA
CAGATCTTTG CATATACACG GCAAGATGAT AACACTACTT TGTTGGTAAT CTTGAACTAT
ACTGATGAGA CTGTTAACCG CCATTATAAT GTGCCAGCTG ATGCGAAGTT ACTAATTAGT
AATTATGAGG ATGATCAAAA TGATACTATC CGGCCATACG AAGCTAAGGT TTATCAATAC
TAG
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| Protein sequence | MENNHWWNKS VVYQIYPKSF QDTNHDGVGD LRGIIDRLDY IKKLGVDVIW LNPIYESPQV
DNGYDISNYE AINPTLGNMD DFQELIDGIH ERGMKLVMDL VVNHTSDQHD WFKESRKSKD
NPYRDYYIWR DGKNGEEPNN WGSYFSGAAW KYDDESGQYY LHLFAPEQPD LNWENPKVRH
SVYDMMNWWA AKGVDGFRMD VINLISKPDG LPDANKNEDE KYANVEPLVS NGHRIHEFLQ
EMNKNVMSKH KMVTVGETPG ATPEDAEKYA SLDNKELNMI FQFEHMGLDS NPNPALGKWD
DRKTTLKDLR ANLTKWQEKL YGKAWNSLYW NNHDQPRVVS RFGNDQTEDY RVKSAKMLAT
MTHMMQGTPY IYEGEEIGMT NAYFPKLEDY VDLESINAYH QLVDDQHLLD GKTMMKYIAI
HSRDNARTPM QWDDSEYAGF SDHTPWEKVN PNYKQINVKD ALADKNSIFY YYQKLIELRH
SMQVITNGKY ALVPGNEDDE QIFAYTRQDD NTTLLVILNY TDETVNRHYN VPADAKLLIS
NYEDDQNDTI RPYEAKVYQY
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