Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Lreu_0082 |
Symbol | |
ID | 5188981 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Lactobacillus reuteri DSM 20016 |
Kingdom | Bacteria |
Replicon accession | NC_009513 |
Strand | + |
Start bp | 97278 |
End bp | 99095 |
Gene Length | 1818 bp |
Protein Length | 605 aa |
Translation table | 11 |
GC content | 42% |
IMG OID | 640589877 |
Product | hypothetical protein |
Protein accession | YP_001270694 |
Protein GI | 148543324 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 40 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGATGGATA ATTATCAAGC AATGAATTTT TACTATGGAC TTCTTAATTT GCGTGCCGGT TTTTTTAAGG CTGACTTATG CGAAATACTA ATGGCGATCG CACAGAGCGT ACCTGATAAA AATCGACAAT CAGCAACGGC ATACCATACT GTAGAAGAGA ATTTAAGTCA AGACCGTGAA CAATTGAAGC ATGATCAAGT TGAATTTGGA TCATTTTATG AAGATGGTCA TATTTTACAT AATGTCAAAA TTAATACCCA ATCAGACTTT TTCCTCGATC CGACCCGGGA AGATACCGTC AAGTGGCATG TTAGTTTCAC GGTTGCTAAA GATGTCCGAC CAGCCGATCA ATTTACTATT CAGCTATCAT CAAATTTGAT GGTTGCGCCT AATGGTCATC CTGAAAAACC AGTTCCTGAC TTTAGTGATC AAGATGGGGT TGTTATTGCG ATGGGGGCCT ATGACCGTGA TAAGCACGAA CTTGTCTATA CTTTTACCAA TTACGTAACC GAGCATCGCC AAATAATTGG TGAATTAGAG GGAGAATTAG CAATTGATCC ACTCACAACT CCAGAGAACG AATTTGGCTT GGAATGTTTT ATAAGTGTTG ATGATCACCG AAAAGACTTT ACGATTGATA TCGACTATCC AGATCTTGCT AACGACATGT TTCTCGGGAT TTCTAGCCGG ATGATGCATT TTGATAAGGA TCAGCAGCTC TTTGAGGACA TTATCTATGT TAATCCAGCA CAAAAAGACC TTAATCATGC CTATATTGTC TTTAACACGA GTGACCTAGT AGAAGAGTTA TCTAATGCCG TAGTAAAACC GTCAACAATG CGGGTTGAGA TTTATCGTAA TTCACGGGGA TTAAAATTAC CTCAATCATA TGGGGTAAAC CTTCAGCGAC TGCGGGATAT TACTAATCGA TTCCCGGTAG TGGAAGGCGA TCACCTTGTC GAGGCACCTT ATACAATGTC CTTTGCTGAT AACAAGATGC GGTTGAATTT TGGTGCAGAC CAGACTAATG ATTCCTATAT TATTAGGGTG GTTGGCCAAT ATAATGATGA GCTTGATGGA ACAGTACGAT TACGGGCTCG TTTATTTGGG ATGGACCAGC AAAATGTTTA TATGAGTAAT TCTACGGCTG CAACAGCTAC TGGCACTTCG ATGGTCGCAA GTGGTCATGC TATTTCTAAG GAGAAGTTAG CGGAGGAGAC AGCGGACACA ACAGAAGACT TGAAGCAAGA AGAACCTTTT GAATCTTCAG CAATTGAAGG AGTGGCGGAA GATGTTGGTA TTCCATCTGC TTCTGATAGT CAGGAACAGT TTACTAGTTC TCAAGCGGAA GAAGAGGAAA TGCCGATCGA AGAAAACCAG GAAGATATCC CGATTAATGA TGTTGCTGCA GAAGAGCAAG TTGAACCTCA AGAAGATTTC CCGCAAAGTG CAATTTCAGT TCCAGATGAT GCAGCCGTTG AAGAAGAATC TGACTCATCA GCTTATATAA TTTCATTTAA TTCAAATGAT GAAGAAGAGG CGACTGCTGC TGAACAAGAA GGAAATCAGG CGGAAGCTCC TACAGTCAGT GCAGCAGTTG GTGGGGATGA ATTATCAATC TCCTTTGATA TCACTCCGCA AGCGGCACCA GCAGAGACTA AAGAAGATCT AACAGAAGAA ACTGAATCTT CAGATGGGAA AGAGGAGACA AGCGCAGCAC CATTACCAAT GCCAGGACGA CGACCACCCC GCCGGCACAG TCGTTTTCAA AATACAACAC GGTCGAATCA TTCGTTGCGT CATTTGCGGA GATTCTAA
|
Protein sequence | MMDNYQAMNF YYGLLNLRAG FFKADLCEIL MAIAQSVPDK NRQSATAYHT VEENLSQDRE QLKHDQVEFG SFYEDGHILH NVKINTQSDF FLDPTREDTV KWHVSFTVAK DVRPADQFTI QLSSNLMVAP NGHPEKPVPD FSDQDGVVIA MGAYDRDKHE LVYTFTNYVT EHRQIIGELE GELAIDPLTT PENEFGLECF ISVDDHRKDF TIDIDYPDLA NDMFLGISSR MMHFDKDQQL FEDIIYVNPA QKDLNHAYIV FNTSDLVEEL SNAVVKPSTM RVEIYRNSRG LKLPQSYGVN LQRLRDITNR FPVVEGDHLV EAPYTMSFAD NKMRLNFGAD QTNDSYIIRV VGQYNDELDG TVRLRARLFG MDQQNVYMSN STAATATGTS MVASGHAISK EKLAEETADT TEDLKQEEPF ESSAIEGVAE DVGIPSASDS QEQFTSSQAE EEEMPIEENQ EDIPINDVAA EEQVEPQEDF PQSAISVPDD AAVEEESDSS AYIISFNSND EEEATAAEQE GNQAEAPTVS AAVGGDELSI SFDITPQAAP AETKEDLTEE TESSDGKEET SAAPLPMPGR RPPRRHSRFQ NTTRSNHSLR HLRRF
|
| |