Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Lreu_0065 |
Symbol | |
ID | 5189771 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Lactobacillus reuteri DSM 20016 |
Kingdom | Bacteria |
Replicon accession | NC_009513 |
Strand | + |
Start bp | 79521 |
End bp | 81308 |
Gene Length | 1788 bp |
Protein Length | 595 aa |
Translation table | 11 |
GC content | 37% |
IMG OID | 640589860 |
Product | glycerophosphoryl diester phosphodiesterase |
Protein accession | YP_001270677 |
Protein GI | 148543307 |
COG category | [C] Energy production and conversion |
COG ID | [COG4781] Membrane domain of membrane-anchored glycerophosphoryl diester phosphodiesterase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 0.253496 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAAAAATG CTTATCGCGC TTTTCGCCAA TACTCTTGCC AGTTCAGGAA AAATTGGCTT GAATATTTAA TATTATTTGG CGGTCTTGAT ATTTTAAACC AGTTTCTGGT AATTCCATTT TTTCGCTGGA TAACTACCTT TGTCCTGCAG GCAGGAGAAA TTCCGTTTAT TTCATATCAA AATATTGTAA TTATTCTGAC CCATCATCCA TTAGTTGTAG TGAGCCTTTT AATTGAATTA ATATGTCTAA TGGTAATTAT CTATGGCGAA TTTATGCTCT TGTTGACGGG CTTTCGTGAA ATTGGCTTGC CAGAGTTTAG CTGGCGCCGA ATGTTTAGGC AAACAAAAGA AACTTTATCG TTACTAAATT TTGGATCGTT AATTCTATTA TTAGGTTACT TTTTGCTTAT TATTCCATTT GCGGATATCA TCTTTCGAAC TCCCCTGCTG GCGAAAATTC AAGTTCCTCA GTTTATTGTT GATTATCTTA CCCGTAATGC ATGGCTTATT GGTGGATTGA CCTTGTTCTA TCTTTTGATG ACAATGATCG GTATTCGTTT AATATTGACA ATGCCGTTAA TGGCTTATCA ACATTTACGG TTAAGAGCTG CTATGTCTCA AAGCTGGCAA ATGACAAGTA AGCTAAGATG GTTGAAGTTT TTAATTCAAA TTGTGCTGAT GACAATAATT GTAGGTAGTA TAACGGTTGT TTTTTACCTC ATGATTTACA TTCTCCAGGT TGTTTTGGAT TTATTACCCG GGAAATTATC TTTGATTACT GCTATCTTTA ACTTGTCGAT CTTACAGCTT GGTGGGGAAG TACTAGCAGT ATGGGCAGGA ACAATTATCT TACTGGTAGT CGTTAACCCC TTAACTAGCA TTAGTGAACT AGCGACAACT CCTGAACATC CATCACGAGG ATTGCTAACT TCCTTTATGC TTGTCTTCCT TGTAATCGGC TTGGCGACTC TTGCAAATAA TACTTTTTAC ATGATGGGAA CGGGGATTAA ACGCCCAATA ACTATCTCTC ATCGGGGAGT TACTGAAAAA AACGGGGTGC AAAATACTAT TCCAGCAATG GAAAAAACAA GTAAACTTAA GCCTGATTAT ATTGAAATGG ATTTGCATGA AACAAAGGAT CACCGGTTTG TTGTGATGCA CGATGAAAAT CTTAAAGACC TAACAGGAGT AAATAAAACA CCTCATGAAC TAACATTGAA GCAATTAACA CGACTAACAG CACGCGAAAA TGGCTATCAT GCTAAGGTTG CGAGTTTTGA TCAATATTTA GCAGCGGCTG AGAAATATCA TCAGAAACTT CTGATTGAGA TAAAAACAAC ACCCCATGAT TCAAAACAGA TGCTCCAGAA TTTTAATCGC CGGTATGGGA AAAGGATTTT GCAAGATCAT GACCAAGTTC ACTCGCTTGA TTACAGTGCT GTGACTAAGC TAAAAAATAT TAATCCGCGG TTAACAGTTT TGTATATTCA ACCCTATAAT TTGGGTAATC CCCAGGGAGT TGCTGACGGT TTTTCGATGG AATATTCAAC ATTAAATCAG GACTTCATTA CTCAAGCCCA GTGGCAACAT AAACCGGTAT ATGCATGGAC GGTTAATGAC ACCGATTTAA TGAAACAGAC TATGTATAAC CACGCTAATG GGATAATTAC CGATGATTTA GGGGAATTAA ATGCGGCAAT AAAAGATTTT ACTGGAAAGC AGAGTTATGC TAATCGAATT CTAAATTATA TTATTGTCGT GCCCACAAGT GGGGGAATTG AACCGTAA
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Protein sequence | MKNAYRAFRQ YSCQFRKNWL EYLILFGGLD ILNQFLVIPF FRWITTFVLQ AGEIPFISYQ NIVIILTHHP LVVVSLLIEL ICLMVIIYGE FMLLLTGFRE IGLPEFSWRR MFRQTKETLS LLNFGSLILL LGYFLLIIPF ADIIFRTPLL AKIQVPQFIV DYLTRNAWLI GGLTLFYLLM TMIGIRLILT MPLMAYQHLR LRAAMSQSWQ MTSKLRWLKF LIQIVLMTII VGSITVVFYL MIYILQVVLD LLPGKLSLIT AIFNLSILQL GGEVLAVWAG TIILLVVVNP LTSISELATT PEHPSRGLLT SFMLVFLVIG LATLANNTFY MMGTGIKRPI TISHRGVTEK NGVQNTIPAM EKTSKLKPDY IEMDLHETKD HRFVVMHDEN LKDLTGVNKT PHELTLKQLT RLTARENGYH AKVASFDQYL AAAEKYHQKL LIEIKTTPHD SKQMLQNFNR RYGKRILQDH DQVHSLDYSA VTKLKNINPR LTVLYIQPYN LGNPQGVADG FSMEYSTLNQ DFITQAQWQH KPVYAWTVND TDLMKQTMYN HANGIITDDL GELNAAIKDF TGKQSYANRI LNYIIVVPTS GGIEP
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