Gene Lreu_0060 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagLreu_0060 
Symbol 
ID5188771 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameLactobacillus reuteri DSM 20016 
KingdomBacteria 
Replicon accessionNC_009513 
Strand
Start bp74093 
End bp75274 
Gene Length1182 bp 
Protein Length393 aa 
Translation table11 
GC content40% 
IMG OID640589855 
Producthypothetical protein 
Protein accessionYP_001270672 
Protein GI148543302 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG0038] Chloride channel protein EriC 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value0.139873 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAATTTT GGCGACTTAA GATTGGAATA TATGCAGTTG TTTGGAGCCT AATAATTGGT 
ATGCTGACAG CGGCGTATTT AAACTTAGTT AACTGGGTAA TTGATTTAGT TTGGCATCAA
TACCTAGATC CGGCAGTTAG TAGTAAATGG TATCCGTTTT TAGTATGTAT TCCATTGGGA
TTTTTGATTG GTTTCTTGAA TGAGCGATGG GGTAATTACC CGTTAACGAT TGAACAAGTG
CTGACGCAAG TAAGGTTGAA GGGGCAATTA AATTATCATA ATTGGTGGAA GTCTTTTATT
CTTGGCTTAT TGGCCCTCGG AGCAGGAGGA AGCATCGGGC CGGAAGCTTC TACAACAGTC
TTAACTAGCA GCATGATTAA TTGGCTTGGT GACCGTATGC GCTGGGCAAC TTCAATGCGC
CAGAAAGTTT CTCTTTGGTA CGGTAAAATG CAAACGCAAG ATTTAGCCCG TGCTCCTAGA
TTCAGTCAGC TTTTTAAAAA TAAATCTCAA CGAGTCTTTG TTATTTCAGG ATTAGTTGGA
ATTGGAATAG TAGGCGCGGC GATTGTTTTT AAGCTTTTTC CTGAAGAAGG TGTTTTTGGG
ATTCATCACC GGATCATTAA TTGGGAGTGG ATCAATTTAT TAACGAGTAT TCCAACGATT
ATCATTGGGA TTGCTTTTGG GTGGCTGTTT GTTCACTTAG AAAATTGGGC TGCACTGATA
ATTAATGCAA AAATAAGTAA GATTTGGCAA GGTGGGATTT TTGGGTTAAT TTTAGCGATC
AGCTCGTTGA TTACAAGCGA TATCTTATTT TCTGGTGAGT TTAGAATTGT TCCTTTTACC
CACGAAGCCT TCAATCATTC AATCATCTTC CTATTAGTTG TAGCACTCGT AAAAGCCGTA
ATGAGTAATC TGGGTTTTGC AATGGGATGG CGGGGAGGAA CTATTTTCCC GGCTATCTTT
TCGAGTGTCG CGGTAGGAAC TGCCTGTGCG ATGATGTTGC CTGGAGACGT ACGGATAAAT
GCAATTGTTG TAATCGCGGC AAGCCTTACC TTTATTTTAG AAAAACCGTT ATTAACAATT
ATCCCGCTGT TATTATTGGT ACCAATTGAA CTAGCGCCGG TTATAATTGT AGTTGCATTT
TTAGTAGGAA GGATTATTAA ACTTTTTCCT GCTAGTGAAT AG
 
Protein sequence
MKFWRLKIGI YAVVWSLIIG MLTAAYLNLV NWVIDLVWHQ YLDPAVSSKW YPFLVCIPLG 
FLIGFLNERW GNYPLTIEQV LTQVRLKGQL NYHNWWKSFI LGLLALGAGG SIGPEASTTV
LTSSMINWLG DRMRWATSMR QKVSLWYGKM QTQDLARAPR FSQLFKNKSQ RVFVISGLVG
IGIVGAAIVF KLFPEEGVFG IHHRIINWEW INLLTSIPTI IIGIAFGWLF VHLENWAALI
INAKISKIWQ GGIFGLILAI SSLITSDILF SGEFRIVPFT HEAFNHSIIF LLVVALVKAV
MSNLGFAMGW RGGTIFPAIF SSVAVGTACA MMLPGDVRIN AIVVIAASLT FILEKPLLTI
IPLLLLVPIE LAPVIIVVAF LVGRIIKLFP ASE