Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Lreu_0060 |
Symbol | |
ID | 5188771 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Lactobacillus reuteri DSM 20016 |
Kingdom | Bacteria |
Replicon accession | NC_009513 |
Strand | + |
Start bp | 74093 |
End bp | 75274 |
Gene Length | 1182 bp |
Protein Length | 393 aa |
Translation table | 11 |
GC content | 40% |
IMG OID | 640589855 |
Product | hypothetical protein |
Protein accession | YP_001270672 |
Protein GI | 148543302 |
COG category | [P] Inorganic ion transport and metabolism |
COG ID | [COG0038] Chloride channel protein EriC |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 19 |
Plasmid unclonability p-value | 0.139873 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAAATTTT GGCGACTTAA GATTGGAATA TATGCAGTTG TTTGGAGCCT AATAATTGGT ATGCTGACAG CGGCGTATTT AAACTTAGTT AACTGGGTAA TTGATTTAGT TTGGCATCAA TACCTAGATC CGGCAGTTAG TAGTAAATGG TATCCGTTTT TAGTATGTAT TCCATTGGGA TTTTTGATTG GTTTCTTGAA TGAGCGATGG GGTAATTACC CGTTAACGAT TGAACAAGTG CTGACGCAAG TAAGGTTGAA GGGGCAATTA AATTATCATA ATTGGTGGAA GTCTTTTATT CTTGGCTTAT TGGCCCTCGG AGCAGGAGGA AGCATCGGGC CGGAAGCTTC TACAACAGTC TTAACTAGCA GCATGATTAA TTGGCTTGGT GACCGTATGC GCTGGGCAAC TTCAATGCGC CAGAAAGTTT CTCTTTGGTA CGGTAAAATG CAAACGCAAG ATTTAGCCCG TGCTCCTAGA TTCAGTCAGC TTTTTAAAAA TAAATCTCAA CGAGTCTTTG TTATTTCAGG ATTAGTTGGA ATTGGAATAG TAGGCGCGGC GATTGTTTTT AAGCTTTTTC CTGAAGAAGG TGTTTTTGGG ATTCATCACC GGATCATTAA TTGGGAGTGG ATCAATTTAT TAACGAGTAT TCCAACGATT ATCATTGGGA TTGCTTTTGG GTGGCTGTTT GTTCACTTAG AAAATTGGGC TGCACTGATA ATTAATGCAA AAATAAGTAA GATTTGGCAA GGTGGGATTT TTGGGTTAAT TTTAGCGATC AGCTCGTTGA TTACAAGCGA TATCTTATTT TCTGGTGAGT TTAGAATTGT TCCTTTTACC CACGAAGCCT TCAATCATTC AATCATCTTC CTATTAGTTG TAGCACTCGT AAAAGCCGTA ATGAGTAATC TGGGTTTTGC AATGGGATGG CGGGGAGGAA CTATTTTCCC GGCTATCTTT TCGAGTGTCG CGGTAGGAAC TGCCTGTGCG ATGATGTTGC CTGGAGACGT ACGGATAAAT GCAATTGTTG TAATCGCGGC AAGCCTTACC TTTATTTTAG AAAAACCGTT ATTAACAATT ATCCCGCTGT TATTATTGGT ACCAATTGAA CTAGCGCCGG TTATAATTGT AGTTGCATTT TTAGTAGGAA GGATTATTAA ACTTTTTCCT GCTAGTGAAT AG
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Protein sequence | MKFWRLKIGI YAVVWSLIIG MLTAAYLNLV NWVIDLVWHQ YLDPAVSSKW YPFLVCIPLG FLIGFLNERW GNYPLTIEQV LTQVRLKGQL NYHNWWKSFI LGLLALGAGG SIGPEASTTV LTSSMINWLG DRMRWATSMR QKVSLWYGKM QTQDLARAPR FSQLFKNKSQ RVFVISGLVG IGIVGAAIVF KLFPEEGVFG IHHRIINWEW INLLTSIPTI IIGIAFGWLF VHLENWAALI INAKISKIWQ GGIFGLILAI SSLITSDILF SGEFRIVPFT HEAFNHSIIF LLVVALVKAV MSNLGFAMGW RGGTIFPAIF SSVAVGTACA MMLPGDVRIN AIVVIAASLT FILEKPLLTI IPLLLLVPIE LAPVIIVVAF LVGRIIKLFP ASE
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