Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Lreu_0059 |
Symbol | |
ID | 5189811 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Lactobacillus reuteri DSM 20016 |
Kingdom | Bacteria |
Replicon accession | NC_009513 |
Strand | + |
Start bp | 72843 |
End bp | 74090 |
Gene Length | 1248 bp |
Protein Length | 415 aa |
Translation table | 11 |
GC content | 39% |
IMG OID | 640589854 |
Product | integral membrane sensor signal transduction histidine kinase |
Protein accession | YP_001270671 |
Protein GI | 148543301 |
COG category | [T] Signal transduction mechanisms |
COG ID | [COG0642] Signal transduction histidine kinase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 10 |
Plasmid unclonability p-value | 0.000404489 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGATTCAAC GTTTTCGCTA TAAATTTATT GCAATCTCAA CTGCGGCATT ATTATTTGTA ATTTTGACAA TTGTTGGCAG TATTTGCACC CTCACTTACT ATCAATCGCA CCAAGAAATT GAACGGGTAT TGACGATTTT GGTAAATAAC GACGGCCAAA TTCCCCGAAA AGGGATCCGG ACTACTGACA ATAGTCAACC TCAATTTTCA CGTGAGGGCC TTCATCAATA TCGTTATTTT GCTGTACTGG TTGATAATAA AAATCAAGTA ACGGAAGTGC AAGATGATCA TATTGCAACG GTTACGCCGC AGGATGCCCG AGCAATGACA GACCGTCTTG TAAGAAGAAA AGTGCATAGC GGGCAGTTGC TATATCGAGG GGTAAATTAT GCTTATAAGA TTCGGAATAA AAACGGCGAG AAAGTAATTG TCTTTCTTGA TGAATCACTC CTCATGGCCC GGACACGATC ACTAATGCAT ACAGGGTTGA TCTTAGGGGT AATTGTTTTA GTTCTGTATA CCATTGTTTT AACCCTTTAC TCGCGTCGTG CAATTCGGCC AATTATTGAA GCAGAGCAGC GGCAAAAAGA ATTTATAACT AATGCTAGTC ATGAATTAAA AACGCCATTG ACAGTTATTT CAGCGAATAA TGAAATGCAA GAGATTATCA ATGGTGAGAA TGAATGGACA ACAAGCACCA AGCAACAGGT TACTCGCCTG ACAAAGTTAA TTAATAACCT GGTGTCACTT GCGCGCATGC AAGAACAACC GACATTAACG ATGTTGCCGG TAAATGTAAG TCAAATTGCC GGGGATGTGG CTAGTAGTTT CAAGAGTGTG ATTTCAACCG AACAGAAACA ATTCAATGTA CAGATTGATG AAGGCTTGGT AGCAAACGCT GATGAAAATA CACTACGGGA ACTGTTGAAT ATTTTGCTTG ATAATGCGAA TAAGTATTGT GATCCTCAGG GTGAAATTGA TTTTACAGTG TCCTCGTCTA ATCATAGTAA AAATATAGTT ATTACGATTG CGAATAGCTA TAAAGATGGT AAAAGCCTGG ATGCTAAAAA ATTCTTTAAC CGCTTTTATC GGGTTGATGA ATCGCATACT CAAGGAAAAA AGGCAGGCTT TGGTATTGGG CTTTCGATGG CTCAATATAT CGTTAAACAA TTCAAAGGGA AAATTACGGC GAAGTATACA AATGGTAAGT TAGCTTTTAT CGTAACGTTA AAAGAAGTAG GAAAGTAA
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Protein sequence | MIQRFRYKFI AISTAALLFV ILTIVGSICT LTYYQSHQEI ERVLTILVNN DGQIPRKGIR TTDNSQPQFS REGLHQYRYF AVLVDNKNQV TEVQDDHIAT VTPQDARAMT DRLVRRKVHS GQLLYRGVNY AYKIRNKNGE KVIVFLDESL LMARTRSLMH TGLILGVIVL VLYTIVLTLY SRRAIRPIIE AEQRQKEFIT NASHELKTPL TVISANNEMQ EIINGENEWT TSTKQQVTRL TKLINNLVSL ARMQEQPTLT MLPVNVSQIA GDVASSFKSV ISTEQKQFNV QIDEGLVANA DENTLRELLN ILLDNANKYC DPQGEIDFTV SSSNHSKNIV ITIANSYKDG KSLDAKKFFN RFYRVDESHT QGKKAGFGIG LSMAQYIVKQ FKGKITAKYT NGKLAFIVTL KEVGK
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