Gene Lreu_0059 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagLreu_0059 
Symbol 
ID5189811 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameLactobacillus reuteri DSM 20016 
KingdomBacteria 
Replicon accessionNC_009513 
Strand
Start bp72843 
End bp74090 
Gene Length1248 bp 
Protein Length415 aa 
Translation table11 
GC content39% 
IMG OID640589854 
Productintegral membrane sensor signal transduction histidine kinase 
Protein accessionYP_001270671 
Protein GI148543301 
COG category[T] Signal transduction mechanisms 
COG ID[COG0642] Signal transduction histidine kinase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value0.000404489 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGATTCAAC GTTTTCGCTA TAAATTTATT GCAATCTCAA CTGCGGCATT ATTATTTGTA 
ATTTTGACAA TTGTTGGCAG TATTTGCACC CTCACTTACT ATCAATCGCA CCAAGAAATT
GAACGGGTAT TGACGATTTT GGTAAATAAC GACGGCCAAA TTCCCCGAAA AGGGATCCGG
ACTACTGACA ATAGTCAACC TCAATTTTCA CGTGAGGGCC TTCATCAATA TCGTTATTTT
GCTGTACTGG TTGATAATAA AAATCAAGTA ACGGAAGTGC AAGATGATCA TATTGCAACG
GTTACGCCGC AGGATGCCCG AGCAATGACA GACCGTCTTG TAAGAAGAAA AGTGCATAGC
GGGCAGTTGC TATATCGAGG GGTAAATTAT GCTTATAAGA TTCGGAATAA AAACGGCGAG
AAAGTAATTG TCTTTCTTGA TGAATCACTC CTCATGGCCC GGACACGATC ACTAATGCAT
ACAGGGTTGA TCTTAGGGGT AATTGTTTTA GTTCTGTATA CCATTGTTTT AACCCTTTAC
TCGCGTCGTG CAATTCGGCC AATTATTGAA GCAGAGCAGC GGCAAAAAGA ATTTATAACT
AATGCTAGTC ATGAATTAAA AACGCCATTG ACAGTTATTT CAGCGAATAA TGAAATGCAA
GAGATTATCA ATGGTGAGAA TGAATGGACA ACAAGCACCA AGCAACAGGT TACTCGCCTG
ACAAAGTTAA TTAATAACCT GGTGTCACTT GCGCGCATGC AAGAACAACC GACATTAACG
ATGTTGCCGG TAAATGTAAG TCAAATTGCC GGGGATGTGG CTAGTAGTTT CAAGAGTGTG
ATTTCAACCG AACAGAAACA ATTCAATGTA CAGATTGATG AAGGCTTGGT AGCAAACGCT
GATGAAAATA CACTACGGGA ACTGTTGAAT ATTTTGCTTG ATAATGCGAA TAAGTATTGT
GATCCTCAGG GTGAAATTGA TTTTACAGTG TCCTCGTCTA ATCATAGTAA AAATATAGTT
ATTACGATTG CGAATAGCTA TAAAGATGGT AAAAGCCTGG ATGCTAAAAA ATTCTTTAAC
CGCTTTTATC GGGTTGATGA ATCGCATACT CAAGGAAAAA AGGCAGGCTT TGGTATTGGG
CTTTCGATGG CTCAATATAT CGTTAAACAA TTCAAAGGGA AAATTACGGC GAAGTATACA
AATGGTAAGT TAGCTTTTAT CGTAACGTTA AAAGAAGTAG GAAAGTAA
 
Protein sequence
MIQRFRYKFI AISTAALLFV ILTIVGSICT LTYYQSHQEI ERVLTILVNN DGQIPRKGIR 
TTDNSQPQFS REGLHQYRYF AVLVDNKNQV TEVQDDHIAT VTPQDARAMT DRLVRRKVHS
GQLLYRGVNY AYKIRNKNGE KVIVFLDESL LMARTRSLMH TGLILGVIVL VLYTIVLTLY
SRRAIRPIIE AEQRQKEFIT NASHELKTPL TVISANNEMQ EIINGENEWT TSTKQQVTRL
TKLINNLVSL ARMQEQPTLT MLPVNVSQIA GDVASSFKSV ISTEQKQFNV QIDEGLVANA
DENTLRELLN ILLDNANKYC DPQGEIDFTV SSSNHSKNIV ITIANSYKDG KSLDAKKFFN
RFYRVDESHT QGKKAGFGIG LSMAQYIVKQ FKGKITAKYT NGKLAFIVTL KEVGK