Gene Lreu_0051 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagLreu_0051 
Symbol 
ID5189904 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameLactobacillus reuteri DSM 20016 
KingdomBacteria 
Replicon accessionNC_009513 
Strand
Start bp64036 
End bp64971 
Gene Length936 bp 
Protein Length311 aa 
Translation table11 
GC content41% 
IMG OID640589847 
ProductLacI family transcription regulator 
Protein accessionYP_001270664 
Protein GI148543294 
COG category[K] Transcription 
COG ID[COG1609] Transcriptional regulators 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.000000000223899 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
TTGGCGACAA TTAAAGATAT TGCACAAAAA GCAGGGGTAT CGGTTTCGAC TGCTTCTCGA 
GCTTTAAACC ATAATCCACG AATTAGTGAA AAAACACGAC AACGAATAGC GACGATTGCT
AAAGAGTTGG GCTATCAACC AAATTACAAT GCACAGAACC TAACACGGGG CGAATCAAAC
ATGGTTGGAA TTATTTTTCC GGTAACCAGT GATACAGCAC CTGCCAACCC TTTCCATATT
GACCTGTTAC GGGGAATTAG CATGGCATTA AAGCCGATTC ACTATGAAAT GGTTGTGGCA
ATTGCGCCAA CTACGACCGA CCTTTTACAA AGCGTAAAAT CGATGGTCGA ACAGTCGAAG
GTGCATAACT TTTTAGTACT TTATACGGTT AAGGATGATC CCATTACTAA TTACCTGCGC
CAAAATAACC TTAATTTTGT GGTAATCGGT CACCCGGATA AGGTCCAAGA TCGCTTTGTC
GACAATGATA ACGTAGCGGC AGGGCAAGCG GCGACTGATT ATCTGATGGA TCATCAGGAG
GTCAGTCACC CCGTCTTTCT TCAATCTGCA AGTAATTGGG CATTTGAACA AGATAGGCAT
CAAGGTTATG AGCAGAGTAT GCAAAATCAT CAACTTCCTG CTCTTAGCTG GCGATATTCA
CCAACGGGGA CCGCAGTTAA AGATTTTATT AAACAACATC CGCAAATCGA TTCAATTGTT
TGTGTTGATG ACTTGTTACT GGTACGATTA ATACGGCAAC TACAAGAATT TAATTTACCA
ACTATTTGTT TTAACAATAG TCGGTTGATG GGGATGTTAA TTAATCAAGA AGAAAAGGTT
GACTTACAAC CCCGCAAATT GGGTCAGCAA GCGGTCGAAT TGCTTTTTAA TCCAGAAGAG
CAGTATCGGA TTGTTGATTT TAAAATAAAT AGTTGA
 
Protein sequence
MATIKDIAQK AGVSVSTASR ALNHNPRISE KTRQRIATIA KELGYQPNYN AQNLTRGESN 
MVGIIFPVTS DTAPANPFHI DLLRGISMAL KPIHYEMVVA IAPTTTDLLQ SVKSMVEQSK
VHNFLVLYTV KDDPITNYLR QNNLNFVVIG HPDKVQDRFV DNDNVAAGQA ATDYLMDHQE
VSHPVFLQSA SNWAFEQDRH QGYEQSMQNH QLPALSWRYS PTGTAVKDFI KQHPQIDSIV
CVDDLLLVRL IRQLQEFNLP TICFNNSRLM GMLINQEEKV DLQPRKLGQQ AVELLFNPEE
QYRIVDFKIN S