Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Lreu_0051 |
Symbol | |
ID | 5189904 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Lactobacillus reuteri DSM 20016 |
Kingdom | Bacteria |
Replicon accession | NC_009513 |
Strand | + |
Start bp | 64036 |
End bp | 64971 |
Gene Length | 936 bp |
Protein Length | 311 aa |
Translation table | 11 |
GC content | 41% |
IMG OID | 640589847 |
Product | LacI family transcription regulator |
Protein accession | YP_001270664 |
Protein GI | 148543294 |
COG category | [K] Transcription |
COG ID | [COG1609] Transcriptional regulators |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 2 |
Plasmid unclonability p-value | 0.000000000223899 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | TTGGCGACAA TTAAAGATAT TGCACAAAAA GCAGGGGTAT CGGTTTCGAC TGCTTCTCGA GCTTTAAACC ATAATCCACG AATTAGTGAA AAAACACGAC AACGAATAGC GACGATTGCT AAAGAGTTGG GCTATCAACC AAATTACAAT GCACAGAACC TAACACGGGG CGAATCAAAC ATGGTTGGAA TTATTTTTCC GGTAACCAGT GATACAGCAC CTGCCAACCC TTTCCATATT GACCTGTTAC GGGGAATTAG CATGGCATTA AAGCCGATTC ACTATGAAAT GGTTGTGGCA ATTGCGCCAA CTACGACCGA CCTTTTACAA AGCGTAAAAT CGATGGTCGA ACAGTCGAAG GTGCATAACT TTTTAGTACT TTATACGGTT AAGGATGATC CCATTACTAA TTACCTGCGC CAAAATAACC TTAATTTTGT GGTAATCGGT CACCCGGATA AGGTCCAAGA TCGCTTTGTC GACAATGATA ACGTAGCGGC AGGGCAAGCG GCGACTGATT ATCTGATGGA TCATCAGGAG GTCAGTCACC CCGTCTTTCT TCAATCTGCA AGTAATTGGG CATTTGAACA AGATAGGCAT CAAGGTTATG AGCAGAGTAT GCAAAATCAT CAACTTCCTG CTCTTAGCTG GCGATATTCA CCAACGGGGA CCGCAGTTAA AGATTTTATT AAACAACATC CGCAAATCGA TTCAATTGTT TGTGTTGATG ACTTGTTACT GGTACGATTA ATACGGCAAC TACAAGAATT TAATTTACCA ACTATTTGTT TTAACAATAG TCGGTTGATG GGGATGTTAA TTAATCAAGA AGAAAAGGTT GACTTACAAC CCCGCAAATT GGGTCAGCAA GCGGTCGAAT TGCTTTTTAA TCCAGAAGAG CAGTATCGGA TTGTTGATTT TAAAATAAAT AGTTGA
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Protein sequence | MATIKDIAQK AGVSVSTASR ALNHNPRISE KTRQRIATIA KELGYQPNYN AQNLTRGESN MVGIIFPVTS DTAPANPFHI DLLRGISMAL KPIHYEMVVA IAPTTTDLLQ SVKSMVEQSK VHNFLVLYTV KDDPITNYLR QNNLNFVVIG HPDKVQDRFV DNDNVAAGQA ATDYLMDHQE VSHPVFLQSA SNWAFEQDRH QGYEQSMQNH QLPALSWRYS PTGTAVKDFI KQHPQIDSIV CVDDLLLVRL IRQLQEFNLP TICFNNSRLM GMLINQEEKV DLQPRKLGQQ AVELLFNPEE QYRIVDFKIN S
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