Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Lreu_0037 |
Symbol | |
ID | 5188791 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Lactobacillus reuteri DSM 20016 |
Kingdom | Bacteria |
Replicon accession | NC_009513 |
Strand | + |
Start bp | 39701 |
End bp | 40936 |
Gene Length | 1236 bp |
Protein Length | 411 aa |
Translation table | 11 |
GC content | 39% |
IMG OID | 640589833 |
Product | hypothetical protein |
Protein accession | YP_001270650 |
Protein GI | 148543280 |
COG category | [V] Defense mechanisms |
COG ID | [COG0577] ABC-type antimicrobial peptide transport system, permease component |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 20 |
Plasmid unclonability p-value | 0.191885 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCAGACAA TTGAGTTGAT CAAATCAGCT ATCCAGTCAT TAAAAGCGAA TAAAAAGCGG AGTTTCCTAA CGATTATTGG AATTATGATT GGTATTGCTG CAGTTATTGC TATCCTTGGA ATTGGGGACG GGATTACGAA AACGATGTAT GATAAGTTCG GTAATAATGC TAAGCAAGGC CAGCAAACGA TTGAAATCGT CTATAATCCT GATAATGTTA ATTCGACCGT CAATGGATTC ACTCAGGAAC AAGTTGCTGA TATTAATACT CAATTTGGTG GTGAAATTAA AAAAGCTGAG ATTGAGCAGG AATCAGATAA TCTGTCAACA CATGCAGATA TTGGTGATGC GACTAAATCA GTGACATTAA GCTTATTAAA GAAGCCAACC CGTGACGTGA AATTCATTGC AGGGCATAAC TTTAGTAAAC GGACTTTTGA ACTCGGGGAT ACGAATGCCT TGATGAGTGA AAAAGTAGCT AGACGGCAAT ATGGTTCAGC ACAAAATGCG CTTGGCACAA CTGTAACAGT AAATAATGTC ACCTATAAAG TTACGGGAGT ATATAAGTCA CAGGCACAGT TCACGGATGA TGGAAATCAA AACTCATATG GTGTTGATTT ATTATTACCG AAAAAAGTTT ACTATCAAGG AGATAGTGCA AAAGAAGGGA ATACACTTAA ATTAACCTTT AGCCAAGGTG TAAATGCCAG TGCTATTTCC CGCAGAGTCG CAAAATACTT AAAAAATAAT AGTTCGGCAG CGACCCAAGG ATCCTATCAA TACCTAGACA TGGAAAAAGC CCTTAAGCAA TTCTCTTCTC AAATGAGTAT CATTACTACT TTCATTAGTT TTATTGCGGC GATTTCTCTT TTCATTGCCG GAATTGGGGT AATGAACATG ATGTATATTT CAGTTTCTGA GCGGACACAA GAAATCGGAA TTCGCTTAGC TGTGGGGGCC ACACCATTTA ACATCATGAT GCAATTTTTA GTGGAAGCAG TAATTCTTAC CATGACAGGT GGATTATTAG GCTTTTTAGG TGGTGCAGGA TTGGCGCACT TACTAGCACC GCTTTTATCA AGTGCGATTG GTGGTGGTGG CATTCATATT CACGCTCATA TTTCACTTAA TGCTTTCTTA TTGGCATTTG GAACATCGGC AGCTGTTGGG TTGATTTTTG GGATCTTACC GGCACGCCAA GCAGCTAATA AGAATTTGAT CGATATCTTG AGATAA
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Protein sequence | MQTIELIKSA IQSLKANKKR SFLTIIGIMI GIAAVIAILG IGDGITKTMY DKFGNNAKQG QQTIEIVYNP DNVNSTVNGF TQEQVADINT QFGGEIKKAE IEQESDNLST HADIGDATKS VTLSLLKKPT RDVKFIAGHN FSKRTFELGD TNALMSEKVA RRQYGSAQNA LGTTVTVNNV TYKVTGVYKS QAQFTDDGNQ NSYGVDLLLP KKVYYQGDSA KEGNTLKLTF SQGVNASAIS RRVAKYLKNN SSAATQGSYQ YLDMEKALKQ FSSQMSIITT FISFIAAISL FIAGIGVMNM MYISVSERTQ EIGIRLAVGA TPFNIMMQFL VEAVILTMTG GLLGFLGGAG LAHLLAPLLS SAIGGGGIHI HAHISLNAFL LAFGTSAAVG LIFGILPARQ AANKNLIDIL R
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