Gene Lreu_0037 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagLreu_0037 
Symbol 
ID5188791 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameLactobacillus reuteri DSM 20016 
KingdomBacteria 
Replicon accessionNC_009513 
Strand
Start bp39701 
End bp40936 
Gene Length1236 bp 
Protein Length411 aa 
Translation table11 
GC content39% 
IMG OID640589833 
Producthypothetical protein 
Protein accessionYP_001270650 
Protein GI148543280 
COG category[V] Defense mechanisms 
COG ID[COG0577] ABC-type antimicrobial peptide transport system, permease component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value0.191885 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCAGACAA TTGAGTTGAT CAAATCAGCT ATCCAGTCAT TAAAAGCGAA TAAAAAGCGG 
AGTTTCCTAA CGATTATTGG AATTATGATT GGTATTGCTG CAGTTATTGC TATCCTTGGA
ATTGGGGACG GGATTACGAA AACGATGTAT GATAAGTTCG GTAATAATGC TAAGCAAGGC
CAGCAAACGA TTGAAATCGT CTATAATCCT GATAATGTTA ATTCGACCGT CAATGGATTC
ACTCAGGAAC AAGTTGCTGA TATTAATACT CAATTTGGTG GTGAAATTAA AAAAGCTGAG
ATTGAGCAGG AATCAGATAA TCTGTCAACA CATGCAGATA TTGGTGATGC GACTAAATCA
GTGACATTAA GCTTATTAAA GAAGCCAACC CGTGACGTGA AATTCATTGC AGGGCATAAC
TTTAGTAAAC GGACTTTTGA ACTCGGGGAT ACGAATGCCT TGATGAGTGA AAAAGTAGCT
AGACGGCAAT ATGGTTCAGC ACAAAATGCG CTTGGCACAA CTGTAACAGT AAATAATGTC
ACCTATAAAG TTACGGGAGT ATATAAGTCA CAGGCACAGT TCACGGATGA TGGAAATCAA
AACTCATATG GTGTTGATTT ATTATTACCG AAAAAAGTTT ACTATCAAGG AGATAGTGCA
AAAGAAGGGA ATACACTTAA ATTAACCTTT AGCCAAGGTG TAAATGCCAG TGCTATTTCC
CGCAGAGTCG CAAAATACTT AAAAAATAAT AGTTCGGCAG CGACCCAAGG ATCCTATCAA
TACCTAGACA TGGAAAAAGC CCTTAAGCAA TTCTCTTCTC AAATGAGTAT CATTACTACT
TTCATTAGTT TTATTGCGGC GATTTCTCTT TTCATTGCCG GAATTGGGGT AATGAACATG
ATGTATATTT CAGTTTCTGA GCGGACACAA GAAATCGGAA TTCGCTTAGC TGTGGGGGCC
ACACCATTTA ACATCATGAT GCAATTTTTA GTGGAAGCAG TAATTCTTAC CATGACAGGT
GGATTATTAG GCTTTTTAGG TGGTGCAGGA TTGGCGCACT TACTAGCACC GCTTTTATCA
AGTGCGATTG GTGGTGGTGG CATTCATATT CACGCTCATA TTTCACTTAA TGCTTTCTTA
TTGGCATTTG GAACATCGGC AGCTGTTGGG TTGATTTTTG GGATCTTACC GGCACGCCAA
GCAGCTAATA AGAATTTGAT CGATATCTTG AGATAA
 
Protein sequence
MQTIELIKSA IQSLKANKKR SFLTIIGIMI GIAAVIAILG IGDGITKTMY DKFGNNAKQG 
QQTIEIVYNP DNVNSTVNGF TQEQVADINT QFGGEIKKAE IEQESDNLST HADIGDATKS
VTLSLLKKPT RDVKFIAGHN FSKRTFELGD TNALMSEKVA RRQYGSAQNA LGTTVTVNNV
TYKVTGVYKS QAQFTDDGNQ NSYGVDLLLP KKVYYQGDSA KEGNTLKLTF SQGVNASAIS
RRVAKYLKNN SSAATQGSYQ YLDMEKALKQ FSSQMSIITT FISFIAAISL FIAGIGVMNM
MYISVSERTQ EIGIRLAVGA TPFNIMMQFL VEAVILTMTG GLLGFLGGAG LAHLLAPLLS
SAIGGGGIHI HAHISLNAFL LAFGTSAAVG LIFGILPARQ AANKNLIDIL R