| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Lreu_0035 |
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| Symbol | |
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| ID | 5189491 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Lactobacillus reuteri DSM 20016 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009513 |
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| Strand | + |
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| Start bp | 37932 |
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| End bp | 39014 |
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| Gene Length | 1083 bp |
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| Protein Length | 360 aa |
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| Translation table | 11 |
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| GC content | 40% |
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| IMG OID | 640589831 |
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| Product | RND family efflux transporter MFP subunit |
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| Protein accession | YP_001270648 |
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| Protein GI | 148543278 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0845] Membrane-fusion protein |
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| TIGRFAM ID | [TIGR01730] RND family efflux transporter, MFP subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 4 |
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| Plasmid unclonability p-value | 0.0000000302663 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACTGCGA AAAGAAACAG CCATCATAAA TCTCGATTAC GACAATTATT TGCAACACGT
CGACGTCGGT GGATTGGCAT CGGTGGCCTA ATTGTAATTA TAATTCTTGT ATTAGTTTCA
ATTCGACATG CAAGTGAGGA AAAAGCAACA GAAAAAAATG AATATAATAT CCTACGGGTT
ACTGAGCAAT CAGATTTTAA TCTGACAGGA AAGATCGAAC CAGTCCAGAC GCAAACACTA
ACCCTGCCAT CTGGTACCCT GCAAAATCTT AATGTGAAAA ATGGGGATCA CGTTGCGCAA
GGAGAAGCAC TTTTGACCAT GCATAATGAT AGTACACAAG ATAGTGTTAC TGAACTGCAG
GGGGACCTTA GTAAAAGTCA ACGAACAATG AATGCTCAAC AACAGACAAT CAATAATTTA
CGCCAACAGT TGAATGGGAT GGGGCAAGGT GATGAAGGAT ACAATGATCT GCGCAATCAG
CTTACCGAGG CACAAAATGC ATATGCAGAC GCACAAGCAA GTGTTGCTGC TACTCAACAA
CGGCTTAACA CCGCTTCAAG CAAGGTTAAT CAAACATTAA CAGCACCTTT TGCTGGTTAT
GTTACGGTTG ATCAATCAAA GCAAAATGCT CCTGTAATTA CCCTTTACTC GGATACGCTT
CAATTTGTCG GTCAAATCTC GGAATATGAT TATAGTAAAC TTCATCAAAG TGCTGATCTA
AAGGTAAAGG CCTTAGCAAC AAATCGAACT GCTAATACTC AGGTAAGTTA TCTTTCAACA
ATTCCAACTA AAAATAGTGG AAATAATACC AAATATGAAG TAACTGCTAA TGTTAGTGCT
AATAAATTTA TGGCGGGGCA GACGGCAAAA GCTTCTATTA AACAAGATGG GGTCCAGATT
TCCAAATCAG CTGTTCGTCA TGGGAAGGTA TTTGTTGTTG ATTCAGACAA CCGAGTTCGC
GAGACAGATG TTAGTGGCCG GGCAGTCAAC AGCTCTTATA TTGTGACTGA TGGCGTTGAT
GCTGGTGATC GGATTGTGAC TAACCCTAAC AGTAAGTTGA AAAATAATGC AAAGGTTGAT
TAA
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| Protein sequence | MTAKRNSHHK SRLRQLFATR RRRWIGIGGL IVIIILVLVS IRHASEEKAT EKNEYNILRV
TEQSDFNLTG KIEPVQTQTL TLPSGTLQNL NVKNGDHVAQ GEALLTMHND STQDSVTELQ
GDLSKSQRTM NAQQQTINNL RQQLNGMGQG DEGYNDLRNQ LTEAQNAYAD AQASVAATQQ
RLNTASSKVN QTLTAPFAGY VTVDQSKQNA PVITLYSDTL QFVGQISEYD YSKLHQSADL
KVKALATNRT ANTQVSYLST IPTKNSGNNT KYEVTANVSA NKFMAGQTAK ASIKQDGVQI
SKSAVRHGKV FVVDSDNRVR ETDVSGRAVN SSYIVTDGVD AGDRIVTNPN SKLKNNAKVD
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