Gene Lreu_0027 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagLreu_0027 
Symbol 
ID5189152 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameLactobacillus reuteri DSM 20016 
KingdomBacteria 
Replicon accessionNC_009513 
Strand
Start bp30429 
End bp30908 
Gene Length480 bp 
Protein Length159 aa 
Translation table11 
GC content34% 
IMG OID640589823 
ProductrRNA large subunit methyltransferase 
Protein accessionYP_001270640 
Protein GI148543270 
COG category[S] Function unknown 
COG ID[COG1576] Uncharacterized conserved protein 
TIGRFAM ID[TIGR00246] rRNA large subunit m3Psi methyltransferase RlmH 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.000611129 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
TTGAATATAA AAATTATTGG TGTGGGTAAG TTAAAAGAAA AGTATTTTAA AGCGGGAATT 
GCTGAATATG CTAAACGACT TGGACGTTAT TGTAAATTTG AAATTGTTGA GGTTCCTGAT
GAAAAAGCAC CTGAATCTTT AAGCCAAGCA GAAATGGATG AAGTAATGGC AAAGGAAGGG
GAACGGATTC TTGATAAAAT CAAAGATCGC GAATATGTAT ATGCTTTAGC GATTAAAGGT
AAAGAACGTT CTTCTGAAGA GTTTGCAAAA GAAATCAATA AATTAACAAC TTATGGTCAC
AGTGATATTA CTTTTGTGAT CGGCGGTTCA TTAGGGTTAA GTCCAGCAGT ATTAAAACGG
GCAGATGCCC AAATTTCGTT TGGACGTTTT ACCTTACCTC ATCAATTAAT GCGTTTAGTT
TTAAGCGAAC AAATTTATCG AGCTTTTACC ATCATCAATG GTCTCCCATA TCATAAATAA
 
Protein sequence
MNIKIIGVGK LKEKYFKAGI AEYAKRLGRY CKFEIVEVPD EKAPESLSQA EMDEVMAKEG 
ERILDKIKDR EYVYALAIKG KERSSEEFAK EINKLTTYGH SDITFVIGGS LGLSPAVLKR
ADAQISFGRF TLPHQLMRLV LSEQIYRAFT IINGLPYHK