Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Lreu_0027 |
Symbol | |
ID | 5189152 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Lactobacillus reuteri DSM 20016 |
Kingdom | Bacteria |
Replicon accession | NC_009513 |
Strand | + |
Start bp | 30429 |
End bp | 30908 |
Gene Length | 480 bp |
Protein Length | 159 aa |
Translation table | 11 |
GC content | 34% |
IMG OID | 640589823 |
Product | rRNA large subunit methyltransferase |
Protein accession | YP_001270640 |
Protein GI | 148543270 |
COG category | [S] Function unknown |
COG ID | [COG1576] Uncharacterized conserved protein |
TIGRFAM ID | [TIGR00246] rRNA large subunit m3Psi methyltransferase RlmH |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 0.000611129 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | TTGAATATAA AAATTATTGG TGTGGGTAAG TTAAAAGAAA AGTATTTTAA AGCGGGAATT GCTGAATATG CTAAACGACT TGGACGTTAT TGTAAATTTG AAATTGTTGA GGTTCCTGAT GAAAAAGCAC CTGAATCTTT AAGCCAAGCA GAAATGGATG AAGTAATGGC AAAGGAAGGG GAACGGATTC TTGATAAAAT CAAAGATCGC GAATATGTAT ATGCTTTAGC GATTAAAGGT AAAGAACGTT CTTCTGAAGA GTTTGCAAAA GAAATCAATA AATTAACAAC TTATGGTCAC AGTGATATTA CTTTTGTGAT CGGCGGTTCA TTAGGGTTAA GTCCAGCAGT ATTAAAACGG GCAGATGCCC AAATTTCGTT TGGACGTTTT ACCTTACCTC ATCAATTAAT GCGTTTAGTT TTAAGCGAAC AAATTTATCG AGCTTTTACC ATCATCAATG GTCTCCCATA TCATAAATAA
|
Protein sequence | MNIKIIGVGK LKEKYFKAGI AEYAKRLGRY CKFEIVEVPD EKAPESLSQA EMDEVMAKEG ERILDKIKDR EYVYALAIKG KERSSEEFAK EINKLTTYGH SDITFVIGGS LGLSPAVLKR ADAQISFGRF TLPHQLMRLV LSEQIYRAFT IINGLPYHK
|
| |