| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Lreu_0024 |
|---|
| Symbol | |
|---|
| ID | 5188795 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Lactobacillus reuteri DSM 20016 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009513 |
|---|
| Strand | + |
|---|
| Start bp | 26665 |
|---|
| End bp | 27939 |
|---|
| Gene Length | 1275 bp |
|---|
| Protein Length | 424 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 38% |
|---|
| IMG OID | 640589820 |
|---|
| Product | peptidase S1 and S6, chymotrypsin/Hap |
|---|
| Protein accession | YP_001270637 |
|---|
| Protein GI | 148543267 |
|---|
| COG category | [O] Posttranslational modification, protein turnover, chaperones |
|---|
| COG ID | [COG0265] Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 33 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAATAGGA TAAAACAAGC TTTTAAAGAT CGGTTGTGGT TAGGCGTAAT TATTGTCGGC
TTATTTGCTG GTCTTATTGG TGGTGGAATC GCCTTAGGAA TTAATAACCT GGTACAACAT
CATGAAGAAG TAACAAGTAC ACGAGTCCCA GCTGGCTCTA ATAAGTCTGG TGGTACGAAG
GTTAATAAGA ATAAGGCGGA CTTAAACGGG GAAGCGTCCC AAGCTTATAA GTCCGTCCAA
GGAGCCGTTG TTAGTGTTAT TAATAAACAA AAGGTTCAGC AATCAAGTGG GACGCTAGGA
ATTTTTGGTT ATGGCAACAG TAGTAACAGC AGCAGTGATT CTTCTAGCGA TAATAAATTA
GAAACCGCTA GTGAAGGGTC AGGAGTTATT TATAAGAAGA GTGGCAATTC GGCTTATGTT
GTAACTAATA ACCACGTTGT CAAAGGTTCA AACGCGCTCC AAGTAATTTT AAGCAATGGT
AAAAAAGTTA ATGCTGATTT AGTTGGTGCT GATTCTGCAA CCGACTTAGC TGTATTGAAG
ATTAACGCTA CAAATGTTAA GACAGTTGCA TCTTTTGGTA ACTCTAATTC GATTGTTCCT
GGTCAGGATG TGCTAGCAAT CGGTTCACCA ATGGGAAGTG AATATGCTAA TACAGTAACG
AAAGGAATTA TTTCTGCCAA AGATCGGACA TTAAAAGCCG GTACTGATGG AACTTTGACA
TCGGTTATCC AAACAGATGC CGCTATTAAC TCTGGTAATT CAGGTGGTCC ATTAATTAAT
ATGGCAGGTC AAGTTATCGG AATTAATTCA ATGAAACTTG CTTCTGATAC ACAAGGCTCT
TCAGTTGAAG GTATTGGTTT TGCCATTCCA AGTAATGAAG TTGTGACAAT TATTAACCAG
TTAATTAAGA ATGGTAAAAT AACTCGTCCA TCACTCGGAA TTAGTATGGT GGATCTTAGT
AATGTTACTT CTGATCAACA GCAATCAGTC TTAAAACTAC CAACAAGCGT AAGCAAAGGG
GTAGTGATTA TAGATGTGAA TAGTGGTTCA GTTGCTGATA CTGCTGGATT GAAAAAATAT
GATGTCATTA CAAAACTTGG TGACACTCAA GTTACAGATG CGGGTTCATT AAAGGCAGCC
TTATATAAAT ACAAGGTTGG ACAAAACGCT AAAGTCACTT ATTACCGTGA TGGTCAACGG
CACACCGCAA CTTTGCATTT AACAAAGAGT GCTGATACAA CATCAACTGA TGACTCACAA
CAAGATAATA ATTAA
|
|---|
| Protein sequence | MNRIKQAFKD RLWLGVIIVG LFAGLIGGGI ALGINNLVQH HEEVTSTRVP AGSNKSGGTK
VNKNKADLNG EASQAYKSVQ GAVVSVINKQ KVQQSSGTLG IFGYGNSSNS SSDSSSDNKL
ETASEGSGVI YKKSGNSAYV VTNNHVVKGS NALQVILSNG KKVNADLVGA DSATDLAVLK
INATNVKTVA SFGNSNSIVP GQDVLAIGSP MGSEYANTVT KGIISAKDRT LKAGTDGTLT
SVIQTDAAIN SGNSGGPLIN MAGQVIGINS MKLASDTQGS SVEGIGFAIP SNEVVTIINQ
LIKNGKITRP SLGISMVDLS NVTSDQQQSV LKLPTSVSKG VVIIDVNSGS VADTAGLKKY
DVITKLGDTQ VTDAGSLKAA LYKYKVGQNA KVTYYRDGQR HTATLHLTKS ADTTSTDDSQ
QDNN
|
|---|
| |