Gene Lreu_0016 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagLreu_0016 
Symbol 
ID5188701 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameLactobacillus reuteri DSM 20016 
KingdomBacteria 
Replicon accessionNC_009513 
Strand
Start bp17279 
End bp17836 
Gene Length558 bp 
Protein Length185 aa 
Translation table11 
GC content31% 
IMG OID640589810 
ProductXRE family transcriptional regulator 
Protein accessionYP_001270629 
Protein GI148543259 
COG category[K] Transcription 
COG ID[COG1476] Predicted transcriptional regulators 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones50 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTCATTTG GCGAACAAAT TCTTAGTCGA TGTAAAGAGT TAGGACTAAC TCAGCAAAAC 
GTTGCAGATG AATTACACAT CACACGACAA ACCCTTTCCA AATGGGAAAA CAACAAAAGT
TACCCTGATT TAAAATTACT TCTTGCTCTC AGTGAGATAT ATCATGTCTC TGTTGATTCA
TTACTTAGAG AGAATAAAGA CCTAACTAGT TTCCTAAACC GCGATAAAGC CTCACAAGCA
TTTAATATCA TTCGTGGATT GTTTTGGTTG CTTATAGGAT TTTATTTTTG GAGTCCTTCT
AATTATTGGT CAAATATTTT AATTCCTATT TTATTTTGTA TTCTGCTAGA ATATTTATAC
TATAAAGAAT GTTTTTTCTT GGGAAAATAC TGGTATAAGC AAAGTCACTA TACTCTTTTA
GGGTATATAT GGACAGCATT AATGATCATA ATTGTAATCT ATGGTCTCAT TAATAAGCAC
CTTAATATGT TACTCTATTG TTTTATATTA GCAATATATT CCTTTTTCCA CCAATACATA
TACAAACCAC GTAAATAA
 
Protein sequence
MSFGEQILSR CKELGLTQQN VADELHITRQ TLSKWENNKS YPDLKLLLAL SEIYHVSVDS 
LLRENKDLTS FLNRDKASQA FNIIRGLFWL LIGFYFWSPS NYWSNILIPI LFCILLEYLY
YKECFFLGKY WYKQSHYTLL GYIWTALMII IVIYGLINKH LNMLLYCFIL AIYSFFHQYI
YKPRK