| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Lreu_0012 |
|---|
| Symbol | |
|---|
| ID | 5188304 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Lactobacillus reuteri DSM 20016 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009513 |
|---|
| Strand | + |
|---|
| Start bp | 13212 |
|---|
| End bp | 14603 |
|---|
| Gene Length | 1392 bp |
|---|
| Protein Length | 463 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 41% |
|---|
| IMG OID | 640589806 |
|---|
| Product | primary replicative DNA helicase |
|---|
| Protein accession | YP_001270625 |
|---|
| Protein GI | 148543255 |
|---|
| COG category | [L] Replication, recombination and repair |
|---|
| COG ID | [COG0305] Replicative DNA helicase |
|---|
| TIGRFAM ID | [TIGR00665] replicative DNA helicase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 23 |
|---|
| Plasmid unclonability p-value | 0.781358 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGATAATG CACCAGTGCA AGAAGAGCCA CGCGATATTG AAGCAGAAAA AGCAGTTCTT
GGAGCTGCTT TTTTAAGTAA AAATGCGTTG GCTGATGCGA TGGAATATCT TGAGCCGCAA
GATTTTTACC GGAAGGCTCA TCAAATCATT TTTGAAAAGA TGGTCCAACT AAATGATGCG
GACCAGCCAA TCGATCCGTT AACGATGAAA AATGTCCTTG ATCAGGATAA TCAAACGGAA
AATGTTGGTG GAGTTGCTTA TATTGCTGAA CTTGCAACAG CGGTTCCGAC GGCTGCTAAT
GTTGTCTATT ACTCAAAGAT TGTTCATGAT AAGGCAATTT CACGACGGTT GATCAATACA
GCAACCAAGA TTATCAATGA TAGCTATGCC GGAAATGACA AAATTGAAGA TCAACTTGAC
CGGGCTGAGC AAGAAATTAT GTCCGTTTCG GAAAATAGTC GTCAAACTGG TTTTAAAAGT
ATTAGTGACG TTTTACAAGA GTCGATTAAC CATGTTAGTG AGCTCTCTAG TCAAGATTCA
GAGATTACTG GACTTTCAAC TGGGTATGCT CAATTAGATG AGATGACGAC TGGTCTTCAT
AAAGACGAGT TGGTAATTAT CGCGGCACGG CCTGCTGTTG GGAAGACTGC CTTTGTTTTG
AATATTGCCC AAAACGTTGC AACTAGAACC GATAATACGG TCGCAATTTT CAGTCTTGAA
ATGGGTGCGG AGTCCTTAGC AAACCGGATG CTCTGTGCTG AAGGAAACAT TAACGCTAAC
CACTTACGAA CTGGACAGCT TACGCAGGAT GAATGGCAAA GTTTATTTAT TGCCACTGGT
GCCTTAAGTA ATGCAAGTAT CTATATTGAC GATACACCAG GAATCAAGGT AGCAGAAATT
CGGGCACGTT GTCGGCGCTT AGCAAAGGAA AAAGGCAATT TAGGCTTGAT CGTAATTGAT
TACCTTCAGT TGATTGAAGG GAGTAATCCT GATAACCGAC AACAAGAAGT TTCAGAAATT
TCTCGACAAC TAAAGAAACT GGCAAAGGAA TTAGAAGTTC CAGTTATTGC CCTATCACAG
TTGTCGCGGG GAGTTGAACA GCGACAAGAC AAGCGCCCGG TTTTATCTGA TATTCGTGAA
TCTGGATCGA TTGAACAGGA TGCAGATATT GTTAGTTTCC TTTATCGTGA TGACTATTAT
GAGCACGATG AAGATTCGGA AGATAATAAT AACCCGGGAA ATAATCAGGA TGACGATGGA
TCAAACGCTA GTGAAGTTGA AGTCATCATC GAAAAGAATC GTAGTGGTCC GCGGGGGACA
GTTAAATTAT TATTTGCAAA GTCTTATAAT AAGTTCACTT CGATTTCCTA TATTCCTGAA
GATAATAATT AA
|
|---|
| Protein sequence | MDNAPVQEEP RDIEAEKAVL GAAFLSKNAL ADAMEYLEPQ DFYRKAHQII FEKMVQLNDA
DQPIDPLTMK NVLDQDNQTE NVGGVAYIAE LATAVPTAAN VVYYSKIVHD KAISRRLINT
ATKIINDSYA GNDKIEDQLD RAEQEIMSVS ENSRQTGFKS ISDVLQESIN HVSELSSQDS
EITGLSTGYA QLDEMTTGLH KDELVIIAAR PAVGKTAFVL NIAQNVATRT DNTVAIFSLE
MGAESLANRM LCAEGNINAN HLRTGQLTQD EWQSLFIATG ALSNASIYID DTPGIKVAEI
RARCRRLAKE KGNLGLIVID YLQLIEGSNP DNRQQEVSEI SRQLKKLAKE LEVPVIALSQ
LSRGVEQRQD KRPVLSDIRE SGSIEQDADI VSFLYRDDYY EHDEDSEDNN NPGNNQDDDG
SNASEVEVII EKNRSGPRGT VKLLFAKSYN KFTSISYIPE DNN
|
|---|
| |