| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pput_R0090 |
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| Symbol | |
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| ID | 5194097 |
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| Type | rRNA |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida F1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009512 |
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| Strand | - |
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| Start bp | 5071460 |
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| End bp | 5074364 |
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| Gene Length | 2905 bp |
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| Protein Length | |
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| Translation table | |
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| GC content | 52% |
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| IMG OID | 640589015 |
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| Product | 23S ribosomal RNA |
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| Protein accession | |
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| Protein GI | |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.253032 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 10 |
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| Fosmid unclonability p-value | 0.011986 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGTCAAGT GAAGAAGCGC ATACGGTGGA TGCCTTGGCA GTCAGAGGCG ATGAAAGACG
TGGTAGCCTG CGATAAGCTT TGGGGAGTCG GCAAACAGAC TGTGATCCAG AGATCTCTGA
ATGGGGGAAC CCAGCCAGCA CAAGCTGGTT ATCTTGTACT GAATACATAG GTGCAAGAGG
CGAACCAGGG GAACTGAAAC ATCTAAGTAC CCTGAGGAAA AGAAATCAAC CGAGATTCCC
TTAGTAGTGG CGAGCGAACG GGGACCAGCC CTTAAGTTGG TTTGAGATTA GTGGAACGCT
CTGGAAAGTG CGGCCATAGT GGGTGATAGC CCCGTACACG AAAATCTCTT ATCAATGAAA
TCGAGTAGGA CGGAGCACGA GAAACTTTGT CTGAATATGG GGGGACCATC CTCCAAGGCT
AAATACTACT GACTGACCGA TAGTGAACCA GTACCGTGAG GGAAAGGCGA AAAGAACCCC
GGAGAGGGGA GTGAAATAGA ACCTGAAACC GTATGCGTAC AAGCAGTGGG AGCCTACTTT
GTTAGGTGAC TGCGTACCTT TTGTATAATG GGTCAGCGAC TTATATTCAG TGGCGAGCTT
AACCGAATAG GGGAGGCGTA GCGAAAGCGA GTCTTAATAG GGCGTTTAGT CGCTGGGTAT
AGACCCGAAA CCGGGCGATC TATCCATGGG CAGGTTGAAG GTTAGGTAAC ACTGACTGGA
GGACCGAACC GACTACCGTT GAAAAGTTAG CGGATGACCT GTGGATCGGA GTGAAAGGCT
AATCAAGCTC GGAGATAGCT GGTTCTCCTC GAAAGCTATT TAGGTAGCGC CTCATGTATC
ACTGTAGGGG GTAGAGCACT GTTTCGGCTA GGGGGTCATC CCGACTTACC AAACCGATGC
AAACTCCGAA TACCTACAAG TGCCGAGCAT GGGAGACACA CGGCGGGTGC TAACGTCCGT
CGTGAAAAGG GAAACAACCC AGACCGTCAG CTAAGGTCCC AAAGTCATGG TTAAGTGGGA
AACGATGTGG GAAGGCTTAG ACAGCTAGGA GGTTGGCTTA GAAGCAGCCA CCCTTTAAAG
AAAGCGTAAT AGCTCACTAG TCGAGTCGGC CTGCGCGGAA GATGTAACGG GGCTCAAACC
ATGCACCGAA GCTACGGGTA TCATCTTATG ATGATGCGGT AGAGGAGCGT TCTGTAAGCC
TGTGAAGGTG AGTTGAGAAG CTTGCTGGAG GTATCAGAAG TGCGAATGCT GACATGAGTA
ACGACAATGC GAGTGAAAAA CTCGCACGCC GAAAGACCAA GGTTTCCTGC GCAACGTTAA
TCGACGCAGG GTTAGTCGGT CCCTAAGGCG AGGCTGAAAA GCGTAGTCGA TGGAAAACAG
GTTAATATTC CTGTACTTCC AGTTATTGCG ATGGAGGGAC GGAGAAGGTT AGGCCAGCCT
GGCGTTGGTT GTCCAGGTTT AAGGTGGTAG GCTGAAATCT TAGGCAAATC CGGGATTTCA
AGGCCGAGAG CTGATGACGA GTTGCCTTTA GGCGACGAAG TGGTTGATAC CATGCTTCCA
AGAAAAGCTC CTAAGCTTCA GATAACTGGG AACCGTACCC CAAACCGACA CAGGTGGTTA
GGTAGAGAAT ACCAAGGCGC TTGAGAGAAC TCGGGTGAAG GAACTAGGCA AAATGGCACC
GTAACTTCGG GAGAAGGTGC GCCGGCGAGG GTTAAGGACT TGCTCCGTAA GCCCATGCCG
GTCGAAGATA CCAGGCCGCT GCGACTGTTT ATTAAAAACA CAGCACTCTG CAAACACGAA
AGTGGACGTA TAGGGTGTGA CGCCTGCCCG GTGCCGGAAG GTTAATTGAT GGGGTTAGCG
CAAGCGAAGC TCTTGATCGA AGCCCCGGTA AACGGCGGCC GTAACTATAA CGGTCCTAAG
GTAGCGAAAT TCCTTGTCGG GTAAGTTCCG ACCTGCACGA ATGGCGTAAC GATGGCGGCG
CTGTCTCCAC CCGAGACTCA GTGAAATTGA AATCGCTGTG AAGATGCAGT GTATCCGCGG
CTAGACGGAA AGACCCCGTG AACCTTTACT ATAGCTTTGC ACTGGACTTT GAATTTGCTT
GTGTAGGATA GGTGGGAGGC TTTGAAGTGG GGACGCCAGT TCTCATGGAG CCATCCTTGA
AATACCACCC TGGCAACTTT GAGGTTCTAA CTCAGGTCCG TTATCCGGAT CGAGGACAGT
GTATGGTGGG TAGTTTGACT GGGGCGGTCT CCTCCCAAAG AGTAACGGAG GAGTACGAAG
GTGCGCTCAG ACCGGTCGGA AATCGGTCGT AGAGTATAAA GGCAAAAGCG CGCTTGACTG
CGAGACAAAC ACGTCGAGCA GGTACGAAAG TAGGTCTTAG TGATCCGGTG GTTCTGTATG
GAAGGGCCAT CGCTCAACGG ATAAAAGGTA CTCCGGGGAT AACAGGCTGA TACCGCCCAA
GAGTTCATAT CGACGGCGGT GTTTGGCACC TCGATGTCGG CTCATCACAT CCTGGGGCTG
AAGCCGGTCC CAAGGGTATG GCTGTTCGCC ATTTAAAGTG GTACGCGAGC TGGGTTTAGA
ACGTCGTGAG ACAGTTCGGT CCCTATCTGC CGTGGACGTT TGAGATTTGA GAGGGGCTGC
TCCTAGTACG AGAGGACCGG AGTGGACGAA CCTCTGGTGT TCCGGTTGTC ACGCCAGTGG
CATTGCCGGG TAGCTATGTT CGGAAGAGAT AACCGCTGAA AGCATCTAAG CGGGAAACTT
GCCTCAAGAT GAGATCTCAC TGGGATCTTG AATCCCCTAA AGGGCCGTCG AAGACTACGA
CGTTGATAGG TTGGGTGTGT AAGCGCTGTG AGGCGTTGAG CTAACCAATA CTAATTGCCC
GTGAGGCTTG ACCATATAAC ACCCA
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| Protein sequence | |
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