Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pput_R0061 |
Symbol | |
ID | 5190953 |
Type | rRNA |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas putida F1 |
Kingdom | Bacteria |
Replicon accession | NC_009512 |
Strand | - |
Start bp | 3909834 |
End bp | 3912738 |
Gene Length | 2905 bp |
Protein Length | |
Translation table | |
GC content | 52% |
IMG OID | 640587952 |
Product | 23S ribosomal RNA |
Protein accession | |
Protein GI | |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 0.6785 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 20 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGTCAAGT GAAGAAGCGC ATACGGTGGA TGCCTTGGCA GTCAGAGGCG ATGAAAGACG TGGTAGCCTG CGATAAGCTT TGGGGAGTCG GCAAACAGAC TGTGATCCAG AGATCTCTGA ATGGGGGAAC CCAGCCAGCA TAAGCTGGTT ATCTTGTACT GAATACATAG GTGCAAGAGG CGAACCAGGG GAACTGAAAC ATCTAAGTAC CCTGAGGAAA AGAAATCAAC CGAGATTCCC TTAGTAGTGG CGAGCGAACG GGGACCAGCC CTTAAGTTGG TTTGAGATTA GTGGAACGCT CTGGAAAGTG CGGCCATAGT GGGTGATAGC CCCGTACACG AAAATCTCTT ATCAATGAAA TCGAGTAGGA CGGAGCACGA GAAACTTTGT CTGAATATGG GGGGACCATC CTCCAAGGCT AAATACTACT GACTGACCGA TAGTGAACCA GTACCGTGAG GGAAAGGCGA AAAGAACCCC GGAGAGGGGA GTGAAATAGA ACCTGAAACC GTATGCGTAC AAGCAGTGGG AGCCTACTTT GTTAGGTGAC TGCGTACCTT TTGTATAATG GGTCAGCGAC TTATATTCAG TGGCGAGCTT AACCGAATAG GGGAGGCGTA GCGAAAGCGA GTCTTAATAG GGCGTTTAGT CGCTGGGTAT AGACCCGAAA CCGGGCGATC TATCCATGGG CAGGTTGAAG GTTAGGTAAC ACTGACTGGA GGACCGAACC GACTACCGTT GAAAAGTTAG CGGATGACCT GTGGATCGGA GTGAAAGGCT AATCAAGCTC GGAGATAGCT GGTTCTCCTC GAAAGCTATT TAGGTAGCGC CTCATGTATC ACTGTAGGGG GTAGAGCACT GTTTCGGCTA GGGGGTCATC CCGACTTACC AAACCGATGC AAACTCCGAA TACCTACAAG TGCCGAGCAT GGGAGACACA CGGCGGGTGC TAACGTCCGT CGTGAAAAGG GAAACAACCC AGACCGTCAG CTAAGGTCCC AAAGTCATGG TTAAGTGGGA AACGATGTGG GAAGGCTTAG ACAGCTAGGA GGTTGGCTTA GAAGCAGCCA CCCTTTAAAG AAAGCGTAAT AGCTCACTAG TCGAGTCGGC CTGCGCGGAA GATGTAACGG GGCTCAAACC ATGCACCGAA GCTACGGGTA TCATCGTATG ATGATGCGGT AGAGGAGCGT TCTGTAAGCC TGTGAAGGTG AGTTGAGAAG CTTGCTGGAG GTATCAGAAG TGCGAATGCT GACATGAGTA ACGACAATGC GAGTGAAAAA CTCGCACGCC GAAAGACCAA GGTTTCCTGC GCAACGTTAA TCGACGCAGG GTTAGTCGGT CCCTAAGGCG AGGCTGAAAA GCGTAGTCGA TGGAAAACAG GTTAATATTC CTGTACTTCC AGTTATTGCG ATGGAGGGAC GGAGAAGGTT AGGCCAGCCT GGCGTTGGTT GTCCAGGTTT AAGGTGGTAG GCTGAAATCT TAGGCAAATC CGGGATTTCA AGGCCGAGAG CTGATGACGA GTTGCCTTTA GGCGACGAAG TGGTTGATAC CATGCTTCCA AGAAAAGCTC CTAAGCTTCA GATAACTGGG AACCGTACCC CAAACCGACA CAGGTGGTTA GGTAGAGAAT ACCAAGGCGC TTGAGAGAAC TCGGGTGAAG GAACTAGGCA AAATGGCACC GTAACTTCGG GAGAAGGTGC GCCGGCGAGG GTTAAGGACT TGCTCCGTAA GCCCATGCCG GTCGAAGATA CCAGGCCGCT GCGACTGTTT ATTAAAAACA CAGCACTCTG CAAACACGAA AGTGGACGTA TAGGGTGTGA CGCCTGCCCG GTGCCGGAAG GTTAATTGAT GGGGTTAGCG CAAGCGAAGC TCTTGATCGA AGCCCCGGTA AACGGCGGCC GTAACTATAA CGGTCCTAAG GTAGCGAAAT TCCTTGTCGG GTAAGTTCCG ACCTGCACGA ATGGCGTAAC GATGGCGGCG CTGTCTCCAC CCGAGACTCA GTGAAATTGA AATCGCTGTG AAGATGCAGT GTATCCGCGG CTAGACGGAA AGACCCCGTG AACCTTTACT ATAGCTTTGC ACTGGACTTT GAATTTGCTT GTGTAGGATA GGTGGGAGGC TTTGAAGTGG GGACGCCAGT TCTCATGGAG CCATCCTTGA AATACCACCC TGGCAACTTT GAGGTTCTAA CTCAGGTCCG TTATCCGGAT CGAGGACAGT GTATGGTGGG TAGTTTGACT GGGGCGGTCT CCTCCCAAAG AGTAACGGAG GAGTACGAAG GTGCGCTCAG ACCGGTCGGA AATCGGTCGT AGAGTATAAA GGCAAAAGCG CGCTTGACTG CGAGACAAAC ACGTCGAGCA GGTACGAAAG TAGGTCTTAG TGATCCGGTG GTTCTGTATG GAAGGGCCAT CGCTCAACGG ATAAAAGGTA CTCCGGGGAT AACAGGCTGA TACCGCCCAA GAGTTCATAT CGACGGCGGT GTTTGGCACC TCGATGTCGG CTCATCACAT CCTGGGGCTG AAGCCGGTCC CAAGGGTATG GCTGTTCGCC ATTTAAAGTG GTACGCGAGC TGGGTTTAGA ACGTCGTGAG ACAGTTCGGT CCCTATCTGC CGTGGACGTT TGAGATTTGA GAGGGGCTGC TCCTAGTACG AGAGGACCGG AGTGGACGAA CCTCTGGTGT TCCGGTTGTC ACGCCAGTGG CATTGCCGGG TAGCTATGTT CGGAAGAGAT AACCGCTGAA AGCATCTAAG CGGGAAACTT GCCTCAAGAT GAGATCTCAC TGGGATCTTG AATCCCCTAA AGGGCCGTCG AAGACTACGA CGTTGATAGG TTGGGTGTGT AAGCGCTGTG AGGCGTTGAG CTAACCAATA CTAATTGCCC GTGAGGCTTG ACCATATAAC ACCCA
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Protein sequence | |
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