| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pput_5302 |
|---|
| Symbol | |
|---|
| ID | 5190248 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pseudomonas putida F1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009512 |
|---|
| Strand | - |
|---|
| Start bp | 5950397 |
|---|
| End bp | 5950804 |
|---|
| Gene Length | 408 bp |
|---|
| Protein Length | 135 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 55% |
|---|
| IMG OID | 640589785 |
|---|
| Product | F0F1 ATP synthase subunit I |
|---|
| Protein accession | YP_001270604 |
|---|
| Protein GI | 148550502 |
|---|
| COG category | [C] Energy production and conversion |
|---|
| COG ID | [COG3312] F0F1-type ATP synthase, subunit I |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 21 |
|---|
| Plasmid unclonability p-value | 0.244326 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 15 |
|---|
| Fosmid unclonability p-value | 0.0929101 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGAAATAC GCACGCCAAA CCGCCTGCCT TTCCATCGCT GGGCGGTTTT TCCGGTACTG
CTGGCTCAAT TTGTCGTACT GCTGCTGGCA ACCTTGGTGG TGTGGCAGTG GAAAGGGTCG
GTCAGTGGAT ATTCAGGCCT TTGCGGAGGT TTGATTGCCT GGCTGCCCAA TGTGTATTTC
GCCTGGAAGG CTTTTCGCTT CAGCGGGGCT CGGGCGGCAC AAGCTATCGT CAAGTCGTTT
TACGCTGGCG AGGCAGGCAA GATGATTTTG ACGGCAGTGC TTTTTGCACT GACCTTTGCA
GGAGTGAAGC CACTGGCGCC GCTAGCAGTA TTCGGCGTCT TCGTGTTGAC CCTTTTGGTC
AGCTGGTTCG CGCCCCTGCT GATGAATAAA AGACTTTCGA GACCTTAG
|
|---|
| Protein sequence | MEIRTPNRLP FHRWAVFPVL LAQFVVLLLA TLVVWQWKGS VSGYSGLCGG LIAWLPNVYF
AWKAFRFSGA RAAQAIVKSF YAGEAGKMIL TAVLFALTFA GVKPLAPLAV FGVFVLTLLV
SWFAPLLMNK RLSRP
|
|---|
| |