| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pput_5297 |
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| Symbol | |
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| ID | 5193575 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida F1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009512 |
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| Strand | - |
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| Start bp | 5946467 |
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| End bp | 5948011 |
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| Gene Length | 1545 bp |
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| Protein Length | 514 aa |
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| Translation table | 11 |
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| GC content | 58% |
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| IMG OID | 640589780 |
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| Product | F0F1 ATP synthase subunit alpha |
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| Protein accession | YP_001270599 |
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| Protein GI | 148550497 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG0056] F0F1-type ATP synthase, alpha subunit |
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| TIGRFAM ID | [TIGR00962] proton translocating ATP synthase, F1 alpha subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 0.259807 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 15 |
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| Fosmid unclonability p-value | 0.119098 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCAGCAAC TCAATCCTTC CGAAATTAGT GAAATCATCA AGGGCCGCAT CGATAACCTC
GATGTGAGCT CCCAAGCCCG TAACGAAGGT ACCGTCGTTT CGGTATCCGA CGGTATCGTG
CGGATCCACG GTCTGGCCGA CGTCATGTAC GGCGAAATGA TCGAGTTCCC TGGCGGCGTC
TACGGCATGG CCCTGAACCT GGAGCAAGAC TCCGTAGGTG CAGTGATCTT GGGTGCCTAT
GACACCCTCG CCGAAGGCAT GAGCGCCAAG TGCACCGGCC GCATCCTGGA AGTTCCGGTT
GGTAAGGAAC TGCTGGGTCG CGTCGTCGAC GCACTGGGCA ACCCGATTGA CGGCAAAGGT
CCTCTGGGCA ACACCCAGAC CGACGCAGTC GAGAAAGTGG CTCCAGGCGT GATCTGGCGT
AAGTCGGTAG ACCAGCCTGT ACAGACTGGT TACAAATCCG TCGACGCCAT GATCCCTGTC
GGCCGTGGCC AGCGTGAGCT GATCATTGGC GACCGTCAGA TCGGCAAGAC CGCCATGGCC
ATCGACGCCA TCATCAACCA GAAAAACTCC GGTATTTTCT GCGTTTATGT TGCTGTCGGC
CAGAAGCGTT CCACCGTTGC CAACATCGTT CGCAAGCTGG AAGAAACCGG CGCCCTGGCC
AACACCATCG TGGTTGTTGC CAGTGCTTCG GAATCCGCCG CACTGCAATT CCTGGCGCCA
TACGCCGGTT GCACCATGGG CGAGTTCTTC CGCGACCGCG GTGAAGACGC ACTGATCGTT
TACGATGACC TGTCCAAGCA GGCCGTTGCC TACCGTCAGA TCTCCCTGCT GCTGCGCCGT
CCACCAGGAC GCGAAGCATA CCCAGGCGAC GTGTTCTATC TCCACTCCCG TCTGCTGGAG
CGTGCATCGC GCGTTTCGGA AGAGTACGTC GAGAAGTTCA CCAACGGTGC TGTCACTGGC
AAAACCGGTT CCCTGACCGC TCTGCCGATC ATCGAAACCC AGGCTGGCGA CGTTTCTGCG
TTCGTTCCGA CCAACGTGAT TTCCATCACC GACGGTCAGA TCTTCCTGGA ATCGGCCATG
TTCAACTCGG GCATCCGCCC TGCAGTGAAC GCCGGTGTTT CGGTATCCCG CGTAGGTGGT
GCCGCTCAGA CCAAGATCAT CAAGAAGCTG TCCGGTGGTA TTCGTACCGC TCTGGCTCAG
TACCGTGAAC TGGCTGCATT CGCCCAGTTC GCGTCCGATC TGGACGAAGC GACCCGCAAG
CAGCTGGAGC ATGGTCAGCG CGTTACCGAG CTGATGAAGC AGAAGCAGTA CGCGCCGATG
TCCATCGCGG ACATGGCTCT GTCGCTGTAC GCCGCTGAGC GTGGCTTCCT GATCGACGTA
GAAGTCTCCA AGATCGGCAG CTTCGAGCAA GCTCTGATCG CCTTCTTCAA CCGTGATCAC
GCTGAACTGA TGGCGAAGAT CAACGTGAAG GGTGACTTCA ACGACGAAAT CGACGCAGGC
CTGAAAGCCG GTATCGAGAA GTTCAAGGCC ACCCAGACCT GGTAA
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| Protein sequence | MQQLNPSEIS EIIKGRIDNL DVSSQARNEG TVVSVSDGIV RIHGLADVMY GEMIEFPGGV
YGMALNLEQD SVGAVILGAY DTLAEGMSAK CTGRILEVPV GKELLGRVVD ALGNPIDGKG
PLGNTQTDAV EKVAPGVIWR KSVDQPVQTG YKSVDAMIPV GRGQRELIIG DRQIGKTAMA
IDAIINQKNS GIFCVYVAVG QKRSTVANIV RKLEETGALA NTIVVVASAS ESAALQFLAP
YAGCTMGEFF RDRGEDALIV YDDLSKQAVA YRQISLLLRR PPGREAYPGD VFYLHSRLLE
RASRVSEEYV EKFTNGAVTG KTGSLTALPI IETQAGDVSA FVPTNVISIT DGQIFLESAM
FNSGIRPAVN AGVSVSRVGG AAQTKIIKKL SGGIRTALAQ YRELAAFAQF ASDLDEATRK
QLEHGQRVTE LMKQKQYAPM SIADMALSLY AAERGFLIDV EVSKIGSFEQ ALIAFFNRDH
AELMAKINVK GDFNDEIDAG LKAGIEKFKA TQTW
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