Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pput_5295 |
Symbol | |
ID | 5191054 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas putida F1 |
Kingdom | Bacteria |
Replicon accession | NC_009512 |
Strand | - |
Start bp | 5944154 |
End bp | 5945530 |
Gene Length | 1377 bp |
Protein Length | 458 aa |
Translation table | 11 |
GC content | 58% |
IMG OID | 640589778 |
Product | F0F1 ATP synthase subunit beta |
Protein accession | YP_001270597 |
Protein GI | 148550495 |
COG category | [C] Energy production and conversion |
COG ID | [COG0055] F0F1-type ATP synthase, beta subunit |
TIGRFAM ID | [TIGR01039] ATP synthase, F1 beta subunit |
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Plasmid Coverage information |
Num covering plasmid clones | 22 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 15 |
Fosmid unclonability p-value | 0.122474 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGTAGCG GACGTATCGT TCAAATCATC GGCGCCGTCA TCGACGTGGA ATTCCCACGT GACGTCGTGC CGAGTGTATA CAACGCGCTT AAAGTACAAG GCGCGGAAAC CACCCTGGAA GTTCAGCAGC AGCTGGGCGA CGGCGTGGTT CGTACCATTG CGATGGGCTC GACCGAAGGC CTGAAGCGCG GTCTGGATGT CGTCGACACC GGCGCTGCCA TTTCCGTTCC AGTTGGTAAG GCCACCTTGG GCCGTATCAT GGACGTACTG GGCAACCCGA TCGACGAAGC CGGCCCGATC GGCGAAGAAG AGCGTCGCGG TATCCACCAG CCAGCGCCTT CGTTCGCTGA CCAGGCAGGC GGCAACGACC TGCTGGAAAC CGGCATCAAG GTTATCGACC TGGTTTGCCC GTTCGCCAAG GGTGGTAAGG TTGGTCTGTT CGGTGGTGCC GGTGTCGGCA AGACCGTAAA CATGATGGAA CTGATCCGTA ACATCGCCAT GGAACACAGC GGTTACTCCG TGTTCGCTGG TGTGGGTGAG CGTACTCGTG AGGGTAACGA CTTCTACCAC GAGATGAAGG ACTCCAACGT TCTCGACAAA GTAGCGCTGG TCTACGGTCA GATGAACGAG CCACCAGGAA ACCGTCTGCG TGTAGCGCTG ACCGGCCTGA CCATGGCCGA GAAGTTCCGT GACGAAGGTA ACGACGTTCT GCTGTTCGTC GACAACATCT ATCGTTACAC CCTGGCCGGT ACCGAAGTAT CCGCACTGCT GGGCCGTATG CCTTCGGCAG TAGGTTACCA GCCGACCCTG GCTGAAGAGA TGGGCGTTCT GCAAGAGCGC ATCACCTCCA CCAAGGAAGG TTCGATCACC TCCGTACAGG CCGTATATGT ACCTGCGGAC GACTTGACCG ACCCGTCGCC AGCGACCACC TTCGCCCACT TGGACGCCAC CGTCGTTCTG TCCCGTGACA TCGCCTCCCT GGGTATCTAC CCAGCGGTCG ACCCACTGGA CTCGACTTCG CGCCAGCTGG ACCCGAACGT GATCGGCAAC GAGCACTACG AGACCGCTCG TGGCGTTCAG TATGTTCTGC AGCGCTACAA AGAGCTGAAG GACATCATTG CGATCCTGGG TATGGACGAA CTGTCCGAAG CCGACAAGCA ACTGGTAGCC CGCGCTCGTA AGATCCAGCG CTTCCTGTCG CAGCCGTTCT TCGTGGCAGA AGTCTTCACC GGTTCGCCAG GTAAGTACGT TTCCCTGAAA GACACCATCG CTGGCTTCAG CGGCATCCTC AAAGGTGACT ACGACCACCT GCCAGAACAA GCGTTCTACA TGGTCGGCAG CATCGACGAA GCGATCGAGA AAGCCAAGAA ACTGTAA
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Protein sequence | MSSGRIVQII GAVIDVEFPR DVVPSVYNAL KVQGAETTLE VQQQLGDGVV RTIAMGSTEG LKRGLDVVDT GAAISVPVGK ATLGRIMDVL GNPIDEAGPI GEEERRGIHQ PAPSFADQAG GNDLLETGIK VIDLVCPFAK GGKVGLFGGA GVGKTVNMME LIRNIAMEHS GYSVFAGVGE RTREGNDFYH EMKDSNVLDK VALVYGQMNE PPGNRLRVAL TGLTMAEKFR DEGNDVLLFV DNIYRYTLAG TEVSALLGRM PSAVGYQPTL AEEMGVLQER ITSTKEGSIT SVQAVYVPAD DLTDPSPATT FAHLDATVVL SRDIASLGIY PAVDPLDSTS RQLDPNVIGN EHYETARGVQ YVLQRYKELK DIIAILGMDE LSEADKQLVA RARKIQRFLS QPFFVAEVFT GSPGKYVSLK DTIAGFSGIL KGDYDHLPEQ AFYMVGSIDE AIEKAKKL
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