| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pput_5289 |
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| Symbol | |
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| ID | 5190908 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida F1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009512 |
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| Strand | + |
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| Start bp | 5937708 |
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| End bp | 5938403 |
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| Gene Length | 696 bp |
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| Protein Length | 231 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 640589772 |
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| Product | 3-oxoacid CoA-transferase, A subunit |
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| Protein accession | YP_001270591 |
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| Protein GI | 148550489 |
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| COG category | [I] Lipid transport and metabolism |
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| COG ID | [COG1788] Acyl CoA:acetate/3-ketoacid CoA transferase, alpha subunit |
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| TIGRFAM ID | [TIGR02429] 3-oxoacid CoA-transferase, A subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 33 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 19 |
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| Fosmid unclonability p-value | 0.496045 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGATCAATA AAACGTTTGA GTCCATCGCC AGCGCGGTAG AAGGCATCAT CGACGGTTCG
ACCATCATGG TCGGTGGCTT TGGTACGGCA GGCATGCCGT CCGAGCTCAT CGACGGGCTG
ATCGCCACTG GTGCCCGCGA CCTGACCATC ATCAGCAACA ACGCCGGCAA CGGCGAGATT
GGTCTGGCCG CCCTGCTCAA AGCGGGCTGC GTGCGCAAGG TGGTCTGCTC GTTCCCGCGC
CAGTCCGACT CCTACGTGTT CGACGAACTG TACCGCGCCG GCAAGATCGA GCTTGAAGTG
GTCCCGCAGG GCAACCTGGC CGAGCGTATC CGCGCCGCGG GCTCGGGCAT CGGTGCGTTC
TTCTCGCCGA CGGGCTACGG CACCCTGCTG GCCGAAGGCA AGGAAACCCG GGAGATCGAC
GGCCGGATGT ATGTACTGGA AATGCCTCTG CACGCCGACT TCGCACTGAT CAAGGCGCAC
AAGGGTGACC GTTGGGGCAA CCTGGTGTAC CGCAAGGCCG CGCGCAACTT CGGCCCGATC
ATGGCCATGG CCGCCAAGAC CGCTATCGCC CAGGTCGACC AGATCGTCGA GCTCGGTGAA
CTGGACCAGG AACACATCAT CACTCCGGGT ATTTTCGTCC AGCGCGTGGT CGCCGTTTCC
GGTGCTGCCG CTTCTTCGAT CATCAACGCT GCCTGA
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| Protein sequence | MINKTFESIA SAVEGIIDGS TIMVGGFGTA GMPSELIDGL IATGARDLTI ISNNAGNGEI
GLAALLKAGC VRKVVCSFPR QSDSYVFDEL YRAGKIELEV VPQGNLAERI RAAGSGIGAF
FSPTGYGTLL AEGKETREID GRMYVLEMPL HADFALIKAH KGDRWGNLVY RKAARNFGPI
MAMAAKTAIA QVDQIVELGE LDQEHIITPG IFVQRVVAVS GAAASSIINA A
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