Gene Pput_5287 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPput_5287 
Symbol 
ID5194491 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas putida F1 
KingdomBacteria 
Replicon accessionNC_009512 
Strand
Start bp5935032 
End bp5936309 
Gene Length1278 bp 
Protein Length425 aa 
Translation table11 
GC content57% 
IMG OID640589770 
Producthistidine kinase 
Protein accessionYP_001270589 
Protein GI148550487 
COG category[T] Signal transduction mechanisms 
COG ID[COG0642] Signal transduction histidine kinase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones29 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones19 
Fosmid unclonability p-value0.531754 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGGCGAAGT CTGATTTTCT GAGTCGGACC TCATCCCTTG CCTCACTCCT GGACCGAATG 
CCCGTGGACG AGCGGCAGAT GACGCTTCAA GTCAGCAGCA CCGCTTACGA GCGATTCTGG
CTGTTTCCAG CCTCACCAAG CCAGCCTTCA GAGTGGTGGA AGTTCGCTCG TCGGCATCTT
CTTGAACCGT TGAGTCATGG GAAGCCTCAG GGAACGCTCT CCATACAGTT TCGAAGCGAA
GATGAGGTTC CACCGGCAAC GATTGATGCG ACAGCGGCTT GGTCTGTGCC GGGTGAAGCG
CTGTGGCCCT CCCCCCGGAC GGCTAGGTTC ATCTACTTGC CTCAGCTCAA TGTAATGGGG
GTGGCCACAC CGCTGAAAAA TGGCACCTGG TTACATGCCG CTTATGCTAA GCCGGTCACG
GACTCTCCGT TTAGTCGCCG AGCATTGGTA TCCCTAGGTA TCACCGCTCT AGCCCTAACC
TTGATTGCCG TGTTGATCGC TCGGGGCATC AGCCAACCAC TGCGAGATTT AGCGCTCGCT
GCCCAGCGAT TGGGCCGAGG CCATTCCGGC ACGGAGTTGC GCGAGCACGG GCCTGAAGAT
ATCCGTCGCA CCGCCAAGGC CTTCAACCAG ATGCAACGCA GAATTCAGCG ATTTGTCGAT
GATCGTACGC GCATGCTCGC CGCGGTGGGC CACGACCTTC GAACTCCGTT GACCTCGCTC
AGGCTGCGCA TTGAGTTCAT TCAGGATCCT GAAGTACAGC GCAAGATGCT TGCGACCCTG
GATGAGATTA CGGCTATCAC TGAAGCCGCA ATCGGGTACG GACGTGACAA TGCTGTGACC
GAGCCAACCA GGACCATGGA CATCGGGACA CTGGTCGAAA GCTTGTGTGA AGACTTGGTC
ACCTTGGGAA TGGCCGTGTC GTTCTCCTGC AACTCAAAAG TCATTTTGGA ATGCCGGCCT
GACGCTCTGC GGCGAGCTAT CCGTAATCTC ATCGAGAATG CTGTAAGGTA CGGCGAGTGT
GCGGACGTCC GCGTCTACAG TGCGGATAAG CACGTTCACA TTTCGGTGAC GGACAGGGGA
AATGGCATCC CTGATTCAGA GCTTGAAGCC GTTTTTACCC CGTTCTATCG CTTGGAACAC
TCCAGAAACC GTAATACTGG CGGCGTCGGT CTGGGCCTCT CCATCGTACG CTCCATAGCC
CGCCAGCATG GCGGTGAGAT CACCCTCACC AACCACAATG GAGGGCTGGA AGCCATCATT
TCGCTCCCTG AAAACTAG
 
Protein sequence
MAKSDFLSRT SSLASLLDRM PVDERQMTLQ VSSTAYERFW LFPASPSQPS EWWKFARRHL 
LEPLSHGKPQ GTLSIQFRSE DEVPPATIDA TAAWSVPGEA LWPSPRTARF IYLPQLNVMG
VATPLKNGTW LHAAYAKPVT DSPFSRRALV SLGITALALT LIAVLIARGI SQPLRDLALA
AQRLGRGHSG TELREHGPED IRRTAKAFNQ MQRRIQRFVD DRTRMLAAVG HDLRTPLTSL
RLRIEFIQDP EVQRKMLATL DEITAITEAA IGYGRDNAVT EPTRTMDIGT LVESLCEDLV
TLGMAVSFSC NSKVILECRP DALRRAIRNL IENAVRYGEC ADVRVYSADK HVHISVTDRG
NGIPDSELEA VFTPFYRLEH SRNRNTGGVG LGLSIVRSIA RQHGGEITLT NHNGGLEAII
SLPEN