Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pput_5287 |
Symbol | |
ID | 5194491 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas putida F1 |
Kingdom | Bacteria |
Replicon accession | NC_009512 |
Strand | + |
Start bp | 5935032 |
End bp | 5936309 |
Gene Length | 1278 bp |
Protein Length | 425 aa |
Translation table | 11 |
GC content | 57% |
IMG OID | 640589770 |
Product | histidine kinase |
Protein accession | YP_001270589 |
Protein GI | 148550487 |
COG category | [T] Signal transduction mechanisms |
COG ID | [COG0642] Signal transduction histidine kinase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 29 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 19 |
Fosmid unclonability p-value | 0.531754 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGGCGAAGT CTGATTTTCT GAGTCGGACC TCATCCCTTG CCTCACTCCT GGACCGAATG CCCGTGGACG AGCGGCAGAT GACGCTTCAA GTCAGCAGCA CCGCTTACGA GCGATTCTGG CTGTTTCCAG CCTCACCAAG CCAGCCTTCA GAGTGGTGGA AGTTCGCTCG TCGGCATCTT CTTGAACCGT TGAGTCATGG GAAGCCTCAG GGAACGCTCT CCATACAGTT TCGAAGCGAA GATGAGGTTC CACCGGCAAC GATTGATGCG ACAGCGGCTT GGTCTGTGCC GGGTGAAGCG CTGTGGCCCT CCCCCCGGAC GGCTAGGTTC ATCTACTTGC CTCAGCTCAA TGTAATGGGG GTGGCCACAC CGCTGAAAAA TGGCACCTGG TTACATGCCG CTTATGCTAA GCCGGTCACG GACTCTCCGT TTAGTCGCCG AGCATTGGTA TCCCTAGGTA TCACCGCTCT AGCCCTAACC TTGATTGCCG TGTTGATCGC TCGGGGCATC AGCCAACCAC TGCGAGATTT AGCGCTCGCT GCCCAGCGAT TGGGCCGAGG CCATTCCGGC ACGGAGTTGC GCGAGCACGG GCCTGAAGAT ATCCGTCGCA CCGCCAAGGC CTTCAACCAG ATGCAACGCA GAATTCAGCG ATTTGTCGAT GATCGTACGC GCATGCTCGC CGCGGTGGGC CACGACCTTC GAACTCCGTT GACCTCGCTC AGGCTGCGCA TTGAGTTCAT TCAGGATCCT GAAGTACAGC GCAAGATGCT TGCGACCCTG GATGAGATTA CGGCTATCAC TGAAGCCGCA ATCGGGTACG GACGTGACAA TGCTGTGACC GAGCCAACCA GGACCATGGA CATCGGGACA CTGGTCGAAA GCTTGTGTGA AGACTTGGTC ACCTTGGGAA TGGCCGTGTC GTTCTCCTGC AACTCAAAAG TCATTTTGGA ATGCCGGCCT GACGCTCTGC GGCGAGCTAT CCGTAATCTC ATCGAGAATG CTGTAAGGTA CGGCGAGTGT GCGGACGTCC GCGTCTACAG TGCGGATAAG CACGTTCACA TTTCGGTGAC GGACAGGGGA AATGGCATCC CTGATTCAGA GCTTGAAGCC GTTTTTACCC CGTTCTATCG CTTGGAACAC TCCAGAAACC GTAATACTGG CGGCGTCGGT CTGGGCCTCT CCATCGTACG CTCCATAGCC CGCCAGCATG GCGGTGAGAT CACCCTCACC AACCACAATG GAGGGCTGGA AGCCATCATT TCGCTCCCTG AAAACTAG
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Protein sequence | MAKSDFLSRT SSLASLLDRM PVDERQMTLQ VSSTAYERFW LFPASPSQPS EWWKFARRHL LEPLSHGKPQ GTLSIQFRSE DEVPPATIDA TAAWSVPGEA LWPSPRTARF IYLPQLNVMG VATPLKNGTW LHAAYAKPVT DSPFSRRALV SLGITALALT LIAVLIARGI SQPLRDLALA AQRLGRGHSG TELREHGPED IRRTAKAFNQ MQRRIQRFVD DRTRMLAAVG HDLRTPLTSL RLRIEFIQDP EVQRKMLATL DEITAITEAA IGYGRDNAVT EPTRTMDIGT LVESLCEDLV TLGMAVSFSC NSKVILECRP DALRRAIRNL IENAVRYGEC ADVRVYSADK HVHISVTDRG NGIPDSELEA VFTPFYRLEH SRNRNTGGVG LGLSIVRSIA RQHGGEITLT NHNGGLEAII SLPEN
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