| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pput_5275 |
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| Symbol | |
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| ID | 5191725 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida F1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009512 |
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| Strand | - |
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| Start bp | 5922472 |
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| End bp | 5923479 |
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| Gene Length | 1008 bp |
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| Protein Length | 335 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 640589758 |
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| Product | transketolase, central region |
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| Protein accession | YP_001270577 |
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| Protein GI | 148550475 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG3958] Transketolase, C-terminal subunit |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 0.181452 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 23 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGCCGCG TAAACACTAC CGAAACCGGC AAGAAGCGCC TGACAACCTC GGCCATGATC
GCTTCGATCG CTGCCGAGGG CCAGGCCACC CGTTCAGCGC CATTCGGCCA TGCGTTGGCG
GCACTGGCCG AACAGCGTTC GGACATCGTC GGCCTGTCGG CGGACCTGTC CAAGTACACC
GACCTGCACA TTTTCGCGAA GGCGCACCCG GACCGTTTTT ATCAGATGGG TATGGCCGAG
CAATTGCTGA TGAGTGCAGC CGCTGGCATG GCACGCGAAG GCTGCGTGCC GTTCGCCACC
ACGTACGCGG TATTCGCCTC GCGCAGGGCC TATGATTTTA TCTGCATGGC CATCGCCGAG
GAGAACCTCA ACGTCAAGAT CGTCTGCGGG TTGCCGGGCT TGACCACCGG TTACGGCCCC
AGCCACCAGG CAACGGATGA TCTGGCAATC TTCCGCGCCA TGCCGAACCT GATGATCGTC
GACCCATGCG ACGCTCTGGA GATCGAGCAG GCGGTGCCTG CCATCGCCGC CCATCAGGGA
CCGGTGTACA TGCGCCTGCT GCGCGGCAAC GTGCCGCTGG TATTGGACGA ATATGGCTAC
AAGTTCGAGA TCGGCAAGGC CAAGACCCTG CGCACCGGAA AGGACGTGCT GATCATTTCC
ACCGGTCTGA TGACCATGCG TTCGCTAGAG GCCGCAGCGC AGTTGCAGAA GGATGGCGTC
GATGTGGCAG TACTGCACGT ACCCACCATC AAGCCACTGG ACGAACAGAC GATTCTGGCT
GAGGCACGCA AGTCCGGACG GTTGGTGGTC ACCGCCGAAA ACCATTCGAT CATCGGCGGC
CTGGGCGAAG CGGTGGCGGG CCTGCTGCTG CGCAACGGGG TAACGCCGAC ATTCCGCCAG
ATCGCCTTGC CCGATGCCTT CCTCGATGCC GGCGCTCTGC CGACGCTGCA TGACCGCTAC
GGTATCTCCA CCGATGCAGT GAGCGCGCAG ATCAAGGCTT GGCTGTGA
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| Protein sequence | MSRVNTTETG KKRLTTSAMI ASIAAEGQAT RSAPFGHALA ALAEQRSDIV GLSADLSKYT
DLHIFAKAHP DRFYQMGMAE QLLMSAAAGM AREGCVPFAT TYAVFASRRA YDFICMAIAE
ENLNVKIVCG LPGLTTGYGP SHQATDDLAI FRAMPNLMIV DPCDALEIEQ AVPAIAAHQG
PVYMRLLRGN VPLVLDEYGY KFEIGKAKTL RTGKDVLIIS TGLMTMRSLE AAAQLQKDGV
DVAVLHVPTI KPLDEQTILA EARKSGRLVV TAENHSIIGG LGEAVAGLLL RNGVTPTFRQ
IALPDAFLDA GALPTLHDRY GISTDAVSAQ IKAWL
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