Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pput_5269 |
Symbol | |
ID | 5195502 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas putida F1 |
Kingdom | Bacteria |
Replicon accession | NC_009512 |
Strand | - |
Start bp | 5915421 |
End bp | 5916629 |
Gene Length | 1209 bp |
Protein Length | 402 aa |
Translation table | 11 |
GC content | 58% |
IMG OID | 640589752 |
Product | cobalamin synthesis protein, P47K |
Protein accession | YP_001270571 |
Protein GI | 148550469 |
COG category | [R] General function prediction only |
COG ID | [COG0523] Putative GTPases (G3E family) |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 27 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 19 |
Fosmid unclonability p-value | 0.55186 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTCCAATC GTCTTCCCGT CACCGTGCTG TCCGGCTTTT TGGGCGCCGG CAAGAGCACG CTGCTCAACC ATGTGCTGCG CAACCGCGAC AACCTGCGGG TGGCGGTAAT CGTCAACGAT ATGAGTGAAA TCAACATCGA TGCCAGTGAG GTGCAGCGCA ATGTCAGCCT CAACCGCGCT GAGGAGAAAC TGGTCGAGAT GAGCAACGGC TGCATTTGCT GCACGTTGCG CGAAGACCTG CTTGAGGAGG TTGCACGGCT GGCCGAAGAG GGACGTTTCG ATTATTTGTT GATCGAATCC ACCGGTATCT CTGAGCCACT GCCAGTGGCT GAGACCTTCA CTTTCCGTGA CGAGCTGGGT CGCAGTCTGT CCGATATGGC GCGACTGGAC ACCATGGTCA CCGTGGTCGA TGGCTTGAAC TTCCTGCGCG ACTATCAAGC AGCAGAGAGC CTGGCCAGCC GTGGTGAAAC GTTGGGCGAA GAAGACGAGC GGTCGATCAG TGATTTGCTG ATCGAACAGG TCGAGTTCGC AGATGTACTG CTGCTGAGCA AGATCGACCT GATCAGCCAA CATGAGCGCG AAGAACTCAT CGCCATTTTG CGCAGCCTCA ATGCCCGGGC GCAGATCGTA CCCATGGTCA TGGGCCAAGT GCCGCTGGCA CGGATCCTCA ACACCGGGCT GTTCGACTTC GATCAAGCGG CCCAGGCACC AGGCTGGTTG CAGGAGCTGC GCGGTGAACA TGTACCAGAA ACCGAAGAGT ACGGAATCGC GGCCATGACC TGGCAGGCCC GACGCCCGCT TCATCCACAG CGCTTTTACG ACTTTATCCA CAAGGACTGG GAAAACGGAA GGCTGCTGCG TTCCAAAGGG TTTTTCTGGT TGGCCAGCAA ATATCAGGAA GCTGGCAGCT GGTCGCAAGC GGGCGGCATG ATGCGCCATG GTCTGGCTGG CCGCTGGTGG CGCTTCGTGC CACGCGAGCA GTGGCCACAG GATGTGGATA ACACGAATGC GATCTTGAAA CACTGGACCA CCGACACCGG TGACTGCCGG CAGGAGTTGG TGTTTATTGG GCAGAATATC GACGTCGAAA AATTATCCAC AGCCCTGGAT GCATGCCTGT TGACGGATCA AGAAATGGGC TTGGGTCACA TGGGCTGGCT GCGTTTACCT GACCCATTTG GCCCATGGCA TGAGGAAGCG GCAGCATGA
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Protein sequence | MSNRLPVTVL SGFLGAGKST LLNHVLRNRD NLRVAVIVND MSEINIDASE VQRNVSLNRA EEKLVEMSNG CICCTLREDL LEEVARLAEE GRFDYLLIES TGISEPLPVA ETFTFRDELG RSLSDMARLD TMVTVVDGLN FLRDYQAAES LASRGETLGE EDERSISDLL IEQVEFADVL LLSKIDLISQ HEREELIAIL RSLNARAQIV PMVMGQVPLA RILNTGLFDF DQAAQAPGWL QELRGEHVPE TEEYGIAAMT WQARRPLHPQ RFYDFIHKDW ENGRLLRSKG FFWLASKYQE AGSWSQAGGM MRHGLAGRWW RFVPREQWPQ DVDNTNAILK HWTTDTGDCR QELVFIGQNI DVEKLSTALD ACLLTDQEMG LGHMGWLRLP DPFGPWHEEA AA
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