Gene Pput_5268 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPput_5268 
Symbol 
ID5195501 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas putida F1 
KingdomBacteria 
Replicon accessionNC_009512 
Strand
Start bp5914798 
End bp5915424 
Gene Length627 bp 
Protein Length208 aa 
Translation table11 
GC content59% 
IMG OID640589751 
Producthypothetical protein 
Protein accessionYP_001270570 
Protein GI148550468 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones36 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones19 
Fosmid unclonability p-value0.484501 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAACCTGG CTCACCGACC TGTGGATATC TTTCAGGTGT TTGGCGAGAC GCCTCAAGTG 
CTGGCCGAAG TGCTGCAGGA TGGCGTGAAC CTGGCCGTCT GGCGGCGGCG CTTGCCGGCA
CAACTGGAGG ACTTTGCCGC ACTGGTGATC AGCCTTGGCC AGCCCTTGGC TGATCAGCGG
GTGATTGATG TGAACGAGGA GCAGAAGCCG GTATTGCCAG ATCTGCTGCG TGAAGCGGCG
GATTTGCATG GGTATGAAGC TTTCGTTGCT GATGTGACGT GGTTGGTGGC GGCTTATACC
TGTCTGGTTG GCGCACGACG GGTCGGTTTG CGCTTGCGCG TGTTGAACGC TCCGATGTGC
CCACGCTTCC ATGTGGATAA CGTACCGTTG CGCTTGCTCA CCACTTACGT CGGCCCAGGT
AGTGAGTGGT TGCAAGAGCG GGATAGCTGT CGTGGAGAGT TACACACAGC TCAGCCACCT
GTGGATAACA TCCAACACCT GCAGGCCGCC GAGGTTGCGG TACTTAAAGG CGAAAAATGG
CAGGGTAACG AAGGGGCAGG CCTGGTGCAT CGGTCCCCTT CTACGCAGCG GGGGCGTTTG
CTGCTCAGCC TTGACTGGCT GGCCTGA
 
Protein sequence
MNLAHRPVDI FQVFGETPQV LAEVLQDGVN LAVWRRRLPA QLEDFAALVI SLGQPLADQR 
VIDVNEEQKP VLPDLLREAA DLHGYEAFVA DVTWLVAAYT CLVGARRVGL RLRVLNAPMC
PRFHVDNVPL RLLTTYVGPG SEWLQERDSC RGELHTAQPP VDNIQHLQAA EVAVLKGEKW
QGNEGAGLVH RSPSTQRGRL LLSLDWLA