Gene Pput_5264 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPput_5264 
Symbol 
ID5193768 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas putida F1 
KingdomBacteria 
Replicon accessionNC_009512 
Strand
Start bp5911918 
End bp5912403 
Gene Length486 bp 
Protein Length161 aa 
Translation table11 
GC content60% 
IMG OID640589747 
Productthioesterase superfamily protein 
Protein accessionYP_001270566 
Protein GI148550464 
COG category[I] Lipid transport and metabolism 
COG ID[COG1607] Acyl-CoA hydrolase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones29 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones20 
Fosmid unclonability p-value0.62859 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGAACCTG GAAACGCCCA GCTGAGCATG ACCGTCCTGA TGACCCCGGA CATGGCCAAC 
TTTTCTGGCA ACGTACATGG CGGCACCCTG CTCAAGTACC TCGACGAAGT GGCTTATGCA
TGCGCCAGCC GTTATGCCGG CAGTTATGTG GTGACCCTGT CGGTCGACCA GGTGATCTTC
CGTGAACCCG TGCACGTGGG TGAACTGGTG ACCTTCCTGG CGTCGGTCAA CTACACCGGC
AACACTTCGA TGGAAGTTGG CATCAAAGTC GTGACCGAGA ACATTCGCGA GCGCTCGGTG
CGCCATTCCA ACAGCTGCTT CTTCACCATG GTCGCGGTCG ACGACAACCG CCGCCCGGTG
CCGGTGCCAC CACGCCAGCC GCACAGCAGC GAAGAAAAGC GCCGCTTCCT GCAAGGCCAG
CAGCGCCGGC AGATCCGCCA GGAACTGGAA AAGCGCTATC AGGACTTGAA AACCGACGCC
ATTTAA
 
Protein sequence
MEPGNAQLSM TVLMTPDMAN FSGNVHGGTL LKYLDEVAYA CASRYAGSYV VTLSVDQVIF 
REPVHVGELV TFLASVNYTG NTSMEVGIKV VTENIRERSV RHSNSCFFTM VAVDDNRRPV
PVPPRQPHSS EEKRRFLQGQ QRRQIRQELE KRYQDLKTDA I