| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pput_5263 |
|---|
| Symbol | |
|---|
| ID | 5190496 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pseudomonas putida F1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009512 |
|---|
| Strand | - |
|---|
| Start bp | 5909818 |
|---|
| End bp | 5911578 |
|---|
| Gene Length | 1761 bp |
|---|
| Protein Length | 586 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 58% |
|---|
| IMG OID | 640589746 |
|---|
| Product | sodium/hydrogen exchanger |
|---|
| Protein accession | YP_001270565 |
|---|
| Protein GI | 148550463 |
|---|
| COG category | [P] Inorganic ion transport and metabolism |
|---|
| COG ID | [COG0475] Kef-type K+ transport systems, membrane components |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 18 |
|---|
| Plasmid unclonability p-value | 0.680967 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 22 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCATGCCA TCAGCTTCAT CCAGGACCTG GCAGTCATCA TGCTGGTCGC TGGCGTGGTC
ACCATTCTTT TTCACCGTTT CAAGCAGCCG GTGGTGCTGG GCTACATTGT CGCCGGCTTC
ATCATTGGCC CGCACACTCC GCCGTTCGGC CTGATTCATG ACGAAGACAC CATCAAGACC
CTCGCCGAAC TGGGGGTGAT CTTCCTGATG TTCTGCCTGG GGCTCGAGTT CAGCTTGCGC
AAGCTGTTCA AGGTCGGTGC CACGGCGTTC ATCGCAGCGT TCCTGGAAAT CGTCCTGATG
ATCTGGATCG GTTTCGAGAT TGGCCGCTGG TTTGGCTGGA GCACCATGGA TTCACTGTTC
CTGGGCGCCA TTCTGGCCAT TTCCTCCACC ACCATCATCG TCAAGGCGCT CAACGACTTG
AAGATGAAGA ACGAGCGCTT TGCCCAGCTG ATCTTCGGCG TGCTGATCGT CGAGGACATT
CTGGGTATCG GTATCATTGC CCTGCTGTCG GGCATCGCGG TCAGCGGCAC GGTCAGTTCG
GGCGAAGTGT TCTCCACTGT CGGCAAGCTG TCGCTGTTCA TGATTGTCGC CTTGGTCATC
GGTATTTTGC TGGTACCGCG GTTACTGGCC TATGTCGCCA AGTTCGAAAG CAACGAAATG
TTGCTGATCA CTGTTCTGGG CCTGTGTTTC GGCTTCTGCC TGCTGGTTGT GAAGCTGGAG
TACAGCATGG TGTTAGGCGC TTTCCTGATT GGCGCGATCA TGGCCGAATC ACGCCAGTTG
CTGAAGATCG AACGCCTGAT CGAGCCTGTA CGCGACCTGT TCAGTGCCAT CTTCTTTGTC
GCCATCGGCC TGATGATCGA CCCTCAGGTA CTGATCGACT ATGCCTGGCC TATCGTTGTC
ATCACCCTGG CGGTGGTGCT GGGCAAAATG CTGTCTTGCG GCATGGGGGC GTTCATTGCC
GGCAATGACG GGCGTACGTC TTTGCGTGTG GGCATGGGGC TTTCGCAGAT CGGCGAGTTC
TCCTTCATCA TTGCCGCGCT GGGCATGACC CTGCAGGTGA CCAGCGACTT CCTTTACCCG
GTGGCGGTGG CGGTATCGGC AATCACCACG TTGCTGACAC CCTATCTGAT CCGCGCGGCT
GACCCGTTGT CGCAGAAACT GGGCAATGTG GTGCCCGCCC GCCTCGCACG CGTGTTGTCG
TTGTATGGCG AGTGGTTACG CAACATCCAG CCGCAGGGCG AGAGTGCCAT GCTGGCGGCG
ATGATCCGGC GTATCCTGTT GCAGGTTGGG GTGAACCTGG CGCTGGTGAT CGCCATCTTC
TTCAGTGGCG GCTACTTTGC AGGGCGTATC GGCAATTGGC TCAGTGAGTG GGTCAGCGAT
GTCAGCCAGC AGAAGGCCGT CATATGGGGG GCTGCTTTGT TGCTGTCACT GCCATTCCTG
ATCGCTGCGT ACCGCAAGCT AAAGGCACTC TCGATGCTGC TGGCAGAGAT GGGCGTGAAG
CCGGAAATGG CCGGGCGACA TACCCAGCGC GTGCGCCGTG TGATCGCCGA AGTGATCCCG
CTGTTGTCGC TGCTGGTGAT TTTCCTGCTG TTGTCGGCAT TGTCCGCCAG CATTCTGCCC
ACCAGCGAAT TGCTGCTGGT GATTGCCGTG GTAGCTGCGG TGGTGGTGGC GTTGTTGTGG
CGCTGGTTTA TCCGCGTGCA CACGCGCATG CAGATCGCGT TGCTAGAGAC GCTGGAGAAC
AGTCGCGAAA ACTCGCACTG A
|
|---|
| Protein sequence | MHAISFIQDL AVIMLVAGVV TILFHRFKQP VVLGYIVAGF IIGPHTPPFG LIHDEDTIKT
LAELGVIFLM FCLGLEFSLR KLFKVGATAF IAAFLEIVLM IWIGFEIGRW FGWSTMDSLF
LGAILAISST TIIVKALNDL KMKNERFAQL IFGVLIVEDI LGIGIIALLS GIAVSGTVSS
GEVFSTVGKL SLFMIVALVI GILLVPRLLA YVAKFESNEM LLITVLGLCF GFCLLVVKLE
YSMVLGAFLI GAIMAESRQL LKIERLIEPV RDLFSAIFFV AIGLMIDPQV LIDYAWPIVV
ITLAVVLGKM LSCGMGAFIA GNDGRTSLRV GMGLSQIGEF SFIIAALGMT LQVTSDFLYP
VAVAVSAITT LLTPYLIRAA DPLSQKLGNV VPARLARVLS LYGEWLRNIQ PQGESAMLAA
MIRRILLQVG VNLALVIAIF FSGGYFAGRI GNWLSEWVSD VSQQKAVIWG AALLLSLPFL
IAAYRKLKAL SMLLAEMGVK PEMAGRHTQR VRRVIAEVIP LLSLLVIFLL LSALSASILP
TSELLLVIAV VAAVVVALLW RWFIRVHTRM QIALLETLEN SRENSH
|
|---|
| |