| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pput_5260 |
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| Symbol | uvrD |
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| ID | 5193614 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida F1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009512 |
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| Strand | + |
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| Start bp | 5905963 |
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| End bp | 5908149 |
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| Gene Length | 2187 bp |
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| Protein Length | 728 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 640589743 |
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| Product | DNA-dependent helicase II |
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| Protein accession | YP_001270562 |
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| Protein GI | 148550460 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0210] Superfamily I DNA and RNA helicases |
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| TIGRFAM ID | [TIGR01075] DNA helicase II |
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Plasmid Coverage information |
| Num covering plasmid clones | 23 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 19 |
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| Fosmid unclonability p-value | 0.658271 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCGCACAG ACGACCTCTC TCTCCTGCTG AATTCCCTCA ACGATGCCCA ACGCCAGGCC
GTAGCGGCCA CGCTCGGGCG TCAACTGGTG CTTGCCGGCG CCGGTTCCGG TAAAACCCGC
GTGCTGGTAC ACCGCATCGC CTGGCTGATC CAGGTCGAGC AGGCATCACC GCACTCGATC
CTGTCGGTGA CGTTCACCAA CAAGGCCGCA GCAGAAATGC GCCAGCGGAT CGAGCAACTG
TTGGGCATCA ACCCGGCAGG CATGTGGGTC GGCACCTTCC ACGGCCTGGC CCATCGCCTG
TTGCGGGCCC ACTGGCAGGA AGCGCGGCTG GTGCAGAACT TCCAGATCCT CGACAGCGAC
GACCAGCAGC GCCTGATCAA GCGGGTCATG CGCGAGTTGG GCCTGGACGA GCAGAAGTGG
CCGGCACGCC AGGCCCAGTG GTTCATCAAC GGGCAGAAAG ACGAAGGCCT GCGCCCGCAG
CATATCCAGG CGGGGGGCGA CCTGTTCCTG GCGACCATGC GCGAGGTCTA TACGGCCTAC
GAGCAGGCGT GCGAGCGCGC CGGTGTCATC GATTTCTCCG AACTGCTGCT TCGCGCCCTG
GACCTGTGGC GTGACCACCC GGGCCTGCTG GAGCACTATC AACGACGCTT CCGCCACGTG
CTGGTGGACG AGTTCCAGGA TACCAACGCC GTGCAGTACG CCTGGTTGCG CCTGCTGGCA
CGCGGTGGCG ACAGCCTGAT GGCGGTAGGC GATGACGACC AGTCGATCTA CGGCTGGCGC
GGCGCCAAGA TCGAAAACAT CCACCAGTAC ACCGCCGACT TCCCCGACGC CGAAATGATC
CGCCTGGAGC AGAACTACCG CTCCACCGGC GGCATCCTCA AGGCGGCCAA CGCGCTGATC
GCCAACAACA GCGGGCGCCT GGGCAAGGAA CTGTGGACCG ACATGGGCGA AGGCGAACCA
CTGACCCTGT ACGCGGCCTA CAACGAGCAC GACGAAGCGC GCTATGTCGT GGAAACCATC
GAGAGCCTGG TCAAGCAGGG TAATGCGCGC AACGAGATCG CCATCCTGTA CCGTTCCAAC
GCCCAGTCGC GCGTGCTGGA AGAGGCCCTG CTGCGCGAAC GCATCCCCTA CCGCATCTAT
GGCGGCCAGC GCTTCTTCGA GCGCGCCGAA ATCAAGAATG CCATGGCTTA CCTGCGCCTG
ATCGAAGGGC GTGGCAACGA TGCCGCTCTG GAGCGGGTGA TCAACGTGCC GCCGCGCGGT
ATTGGCGAAA AAACCGTCGA AGCCATCCGC GAGCACGCCC GTCACAGCCA GCTGTCCATG
TGGGAGGCCA TGTGCCAGCT GCTCGCCGCC AAAGCCCTGA AGGGCCGCGC CGCCAGTGCC
CTGGGGGCCT TTATCGAGCT GATCGAGGGG CTGGCCGCCA AGGTTGTGGA CATGCCGCTG
CATACCATGA CCCAGACCAC CATCGAACAG TCCGGCCTGA TCACCTATCA CCAGGAAGAA
AAAGGTGAAA AGGGCCAGGC ACGCGTAGAA AACCTTGAGG AACTGGTCAG TGCGGCACGC
AACTTCGAGT CCACCGACGA AGACGCCGAC CTGTCCCCGC TCTCGGCCTT CCTTGGCCAC
GCCTCACTCG AAGCTGGCGA TACTCAGGCT GACGAGCATG AAGACAGCAT CCAGCTGATG
ACCCTGCACA GCGCCAAAGG CCTGGAGTTC CCCTATGTGT TCCTGGTGGG CATGGAAGAA
GGCTTGTTCC CGCACAAGAT GAGCCTGGAA GAACCCGGCC GTCTGGAAGA GGAACGACGC
CTGGCCTATG TAGGCATCAC CCGCGCCATG CGCCAGCTGG TCATGACCTA TGCCGAAACA
CGCCGCCTTT ATGGCAGCGA GACTTACAAC AAGGTGTCGC GTTTCGTGCG TGAAATTCCG
GCCGGCCTGG TTCAGGAAGT ACGCCTGTCC AACAGTGTCA GCCGCCCGTT CGGCGGGGCC
AAGACGGCCA CCAACAGCAA CCTGTTCGCC AATGCCAGCA TTCCGCAGAC CGCGTTCAAC
CTTGGCCAGC GTGTGCAGCA TGCGGTATTC GGCGAAGGCG TAATCCTCAA CTTCGAGGGT
TCTGGCGCTC AGGCGCGGGT GCAGGTGAAT TTTGCCGAAG GTAGCAAATG GCTGATGCTG
GGGTATGCCA AGCTCGAGGC TGTCTAA
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| Protein sequence | MRTDDLSLLL NSLNDAQRQA VAATLGRQLV LAGAGSGKTR VLVHRIAWLI QVEQASPHSI
LSVTFTNKAA AEMRQRIEQL LGINPAGMWV GTFHGLAHRL LRAHWQEARL VQNFQILDSD
DQQRLIKRVM RELGLDEQKW PARQAQWFIN GQKDEGLRPQ HIQAGGDLFL ATMREVYTAY
EQACERAGVI DFSELLLRAL DLWRDHPGLL EHYQRRFRHV LVDEFQDTNA VQYAWLRLLA
RGGDSLMAVG DDDQSIYGWR GAKIENIHQY TADFPDAEMI RLEQNYRSTG GILKAANALI
ANNSGRLGKE LWTDMGEGEP LTLYAAYNEH DEARYVVETI ESLVKQGNAR NEIAILYRSN
AQSRVLEEAL LRERIPYRIY GGQRFFERAE IKNAMAYLRL IEGRGNDAAL ERVINVPPRG
IGEKTVEAIR EHARHSQLSM WEAMCQLLAA KALKGRAASA LGAFIELIEG LAAKVVDMPL
HTMTQTTIEQ SGLITYHQEE KGEKGQARVE NLEELVSAAR NFESTDEDAD LSPLSAFLGH
ASLEAGDTQA DEHEDSIQLM TLHSAKGLEF PYVFLVGMEE GLFPHKMSLE EPGRLEEERR
LAYVGITRAM RQLVMTYAET RRLYGSETYN KVSRFVREIP AGLVQEVRLS NSVSRPFGGA
KTATNSNLFA NASIPQTAFN LGQRVQHAVF GEGVILNFEG SGAQARVQVN FAEGSKWLML
GYAKLEAV
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