| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pput_5258 |
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| Symbol | |
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| ID | 5193266 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida F1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009512 |
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| Strand | - |
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| Start bp | 5903336 |
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| End bp | 5904202 |
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| Gene Length | 867 bp |
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| Protein Length | 288 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 640589741 |
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| Product | RpiR family transcriptional regulator |
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| Protein accession | YP_001270560 |
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| Protein GI | 148550458 |
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| COG category | [K] Transcription |
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| COG ID | [COG1737] Transcriptional regulators |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 37 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 20 |
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| Fosmid unclonability p-value | 0.658899 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGAATCTGT TGCAACATAT CGCCCAATCG CGCCACCTGC TGCGCAAATC GGAACTGAAA
GTGGCCGACC ACGTGCTGCT CGACCCGGCT GCCGTCATGC ACAGCTCCAT GGCCGATTTG
GCGCACAGCG TGGGTATCAG TGAGCCGACC ATCGTGCGTT TCTGCCGGGC CATAGGCTGC
TCGGGCTTCC AGGACCTGAA GCTGAAGCTG GCGCAAAGCC TGGCTGCCGG GGCCAGCTTC
GGCCAGTTCG CTATCCACGA AGACGATTCG GTCGCCGACT ACAGTCTGAA GATCTTCGAC
ACCACCCTGC ACACCCTGAT GGAAGTGCGC GAGCACCTTG ATCCGCAGGC ACTGCAACAA
GCCGTGAGCG CCATGGCCCA GGCGCAACGG GTAGAGTTTT ATGGCTTTGG CGCGTCCGGT
GCCGTTGCGG CCGATGCCCA GCACAAGTTC TTCCGCCTGC TGCTCAGCGC GGCAGCGTAT
TCCGACCCCC ACATGCAAGC GATGTCGGCG GTTACCCTGA AACCGGGAGA TGTGGCGGTG
TGTATCTCCC AATCGGGCCG TTCCAAGGAC CTGCTGATCA CTGCCAACCT GGTCCGTGAG
AGCGGCGCCA ACCTGATTAC CCTGTGCCCC AGCCAGACGC CGCTGGCCGA GCTATCGACG
GTCAACCTGG CGATCGACGT GCATGAAGAC ACCGAGATCT ACACCCCACT GACCTCGCGT
ATTGCCCACC TGGTGGTGAT CGACGTGCTG GCCATGGGCG TTGCCATGGC GCGCGGGCCT
AGCCTGGTCA ACCACCTGAA GAGCGTGAAA CGCAGCCTGC GCAGCTTGCG TCTGTCGCCC
AAGTCGATCA AGGCTACCGA CGACTGA
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| Protein sequence | MNLLQHIAQS RHLLRKSELK VADHVLLDPA AVMHSSMADL AHSVGISEPT IVRFCRAIGC
SGFQDLKLKL AQSLAAGASF GQFAIHEDDS VADYSLKIFD TTLHTLMEVR EHLDPQALQQ
AVSAMAQAQR VEFYGFGASG AVAADAQHKF FRLLLSAAAY SDPHMQAMSA VTLKPGDVAV
CISQSGRSKD LLITANLVRE SGANLITLCP SQTPLAELST VNLAIDVHED TEIYTPLTSR
IAHLVVIDVL AMGVAMARGP SLVNHLKSVK RSLRSLRLSP KSIKATDD
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