Gene Pput_5254 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPput_5254 
Symbol 
ID5193456 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas putida F1 
KingdomBacteria 
Replicon accessionNC_009512 
Strand
Start bp5897743 
End bp5898414 
Gene Length672 bp 
Protein Length223 aa 
Translation table11 
GC content63% 
IMG OID640589737 
ProductGCN5-related N-acetyltransferase 
Protein accessionYP_001270556 
Protein GI148550454 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG1670] Acetyltransferases, including N-acetylases of ribosomal proteins 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones28 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones20 
Fosmid unclonability p-value0.579785 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACAGACG CATTGAACTG GAAACCCGCC GCAACCCCCA AGGCCGAGCC CATTGAAGGC 
CGCTTCATCC GCCTGGAGAA ACTCGATCCA GGGCGCCATG GCGAAGACCT CTGGGAAGTG
CTGCAGGGTC CGGCCTCCGA TCCGGTGCTG TGGGACTACC TGCCGTACGG CCCGTTCGCC
GAACGTGCCG CCTTTGACCG CTGGCTGGAA GGCAACGCTG CTGGCCGCGA CCCGCTTTTC
TACACCGTCA TCGACCGCGC CAGCGGCCAG GCCCAAGGCA TCCTCAGCCT GATGTCGATC
GTGCCTGACC ACGGTCGGAT CGAGATCGGC CACATTGCCT TCGGTGCCGC CATGCAGCGT
ACGCCCAAAG GTACCGAGGC GGTGTACCTG CTGGGCAAGC TGGGCTTCGC GCTGGGTAAT
CGACGGCTGG AGTGGAAGTG CAATAACGCC AATGCCCGCT CCAAACGTGC GGCAGAGCGA
TTCGGCTTCG TCTACGAAGG GGTGTTCCGC AAGCACTTGG TGGTGAAAGA CCATAACCGC
GATACGGCGT GGTATTCGAT TACCGATGAT GAATGGCCGG CGGTGGCTGC CGGGTTTGAG
CGGTGGTTGA GTGAAGAGAA CCAGCAGCCG GGTGGCCAGG TGGAAAGCCT TGAGGTGTGC
CGCCGAGGTT GA
 
Protein sequence
MTDALNWKPA ATPKAEPIEG RFIRLEKLDP GRHGEDLWEV LQGPASDPVL WDYLPYGPFA 
ERAAFDRWLE GNAAGRDPLF YTVIDRASGQ AQGILSLMSI VPDHGRIEIG HIAFGAAMQR
TPKGTEAVYL LGKLGFALGN RRLEWKCNNA NARSKRAAER FGFVYEGVFR KHLVVKDHNR
DTAWYSITDD EWPAVAAGFE RWLSEENQQP GGQVESLEVC RRG