| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pput_5246 |
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| Symbol | |
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| ID | 5190898 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida F1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009512 |
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| Strand | - |
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| Start bp | 5888807 |
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| End bp | 5889733 |
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| Gene Length | 927 bp |
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| Protein Length | 308 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 640589729 |
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| Product | LysR family transcriptional regulator |
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| Protein accession | YP_001270548 |
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| Protein GI | 148550446 |
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| COG category | [K] Transcription |
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| COG ID | [COG0583] Transcriptional regulator |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 0.214588 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 16 |
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| Fosmid unclonability p-value | 0.158327 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTGCTTCG TGAACCTTGA AAGCAAATGG CTGGAAGACT TCAGTGCTCT GGCCGCTACC
CGCAGTTTTT CCCAGGCCGC AGAGCGGCGT TTCGTGACCC AACCGGCCTT CAGCCGGCGC
ATTCGCAGCC TTGAGGCGGC GTTGGGCCTG CAACTGGTGA ACCGCTCTCG CACACCCATC
GAGTTGACCG AGGCGGGTCA GCTATTTCTC GTCACAGCAC GTACTGTTGT CGACCAGTTG
AGCGAAATTC TCCGCCATTT GCATCACTTG GAAGGCGGGC AGGGCGAAGT GGTGCAGGTA
GCTGCGGCAC ACTCCTTGGC GTCGGGTTTC TTCCCCCGTT GGGTGGCCCA GTTGCGCAAC
GACGGGTTGA ACATCGCCAC CCGCCTGGTT GCGACTAACG TCGGAGATGC TGTGCATGCA
CTGCGCGAAG GCGGCTGCGA CCTGATGCTG GCGTTCTACG ACCCGGACGC GGCCTTGCAG
ATGGATGCCG AGATCTTCCC GTCGCTGCAC ATGGGCACCA CTGAAATGCT GCCGGTGTGC
GCCGTGGATG CCGATGGCAA GCCGTTGTTC GACCTGGAGG GCGAGGGCAG TGTGCCGTTG
CTAGCCTACA CCGCCGGCGC ATTCCTCGGC CGCTCGGTCA ACTTGCTGTT GCGCCAGCGC
AACCTGCGTT ATACCACCGT CTACGAAACC GCCATGGCCG ACAGTCTCAA GAGCATGGCC
CTGGAGGGGA TGGGCATCGC TTGGGTGCCG CGCCTGTCGA TGCGTGGCGA GCTCGAACGC
GGTGAGCTGG CGATCTGCGG CGGTAGCCAA TGGCATGTGC CGCTGGAAAT CCGCCTGTAC
CGCTGTGCTT TGGTTCGTAA GGCTAACGTC CGCTTGCTAT GGCGCAAGCT GGAGTCGTCT
GGCGCACAAG GTGAAGCGTC AATTTGA
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| Protein sequence | MCFVNLESKW LEDFSALAAT RSFSQAAERR FVTQPAFSRR IRSLEAALGL QLVNRSRTPI
ELTEAGQLFL VTARTVVDQL SEILRHLHHL EGGQGEVVQV AAAHSLASGF FPRWVAQLRN
DGLNIATRLV ATNVGDAVHA LREGGCDLML AFYDPDAALQ MDAEIFPSLH MGTTEMLPVC
AVDADGKPLF DLEGEGSVPL LAYTAGAFLG RSVNLLLRQR NLRYTTVYET AMADSLKSMA
LEGMGIAWVP RLSMRGELER GELAICGGSQ WHVPLEIRLY RCALVRKANV RLLWRKLESS
GAQGEASI
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