| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pput_5240 |
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| Symbol | |
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| ID | 5194755 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida F1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009512 |
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| Strand | + |
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| Start bp | 5884381 |
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| End bp | 5885277 |
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| Gene Length | 897 bp |
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| Protein Length | 298 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 640589723 |
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| Product | aldose 1-epimerase |
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| Protein accession | YP_001270542 |
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| Protein GI | 148550440 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG0676] Uncharacterized enzymes related to aldose 1-epimerase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 0.39186 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 15 |
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| Fosmid unclonability p-value | 0.120069 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCTACCT TTCAGGTCGT AACCGAGCAA CATGGCGAAC TCAACTGCTG GCGTATCAGC
AGTGACCGTG CCGAACTCCT GATCGCCCAG CAGGGCGCAC AGGTCCTCAG CTACCAGCAG
GTGGGCGAAC CGCCACTGCT GTGGCTGAGC GACCAGGCCA TCTTCCGCCA GGGCAAGTCG
GTACGCGCCG GGGTACCGGT GTGCTGGCCA TGGTTTGGCA ACCTGCAGCG CAACCCTGAG
GCCGTCCAGG CCATGTACCA GGGAACACCG GCGCCTGCCC ACGGGCTTGC GCGCACGCGT
GACTGGAAAT TGCTGGGTAT CAAAGAAGTG GGCGAGACCC TGCGGATCGA GTTCGAACTG
CCTGAAGCGC GGGGCGACCT GCCCGGTTGG CCCCATGATG TCGAGCTGAA ACTGGTGGTG
GAGATGGGCG CAGACCTGAC ACTGAGCCTG ACCAGCCGCA ACATGGGCAA TACCCCCGTG
ACCATCAGCC AGGCCCTGCA TAGCTACTTC GCGGTCAGCG ATGTGCGCCA GGCGCGGGTC
GAGGGTGTCG ACGGGCTGGG TTATATCGAA ACCCTGGCGG GCTGGGAACA ACGCCAGCAG
CAGGGGGCAC TGACGTTTGC CGGGGAGACG GACCGAATCT ACCTGAACAC CCCGCAGACC
CTCAGCATCG TCGACCCGCA TTGGAATCGG CGGATTACCT TGACCAGCAG CGGCTCGCGC
TCGACGGTGA TCTGGAACCC GTGGACCGAG CGAGCCAAAG ACTTGGCGGA CATGGCTGAT
GATGGCTGGC AGCGGATGTT GTGCATCGAG ACGGCGAATG TGTGGGATGA CCTGGTGGAG
TTGAAGCCTG GGGCGAGTCA TTCGCTGGGC GTCCAGATCG GTTGTGAAAA TATCTGA
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| Protein sequence | MATFQVVTEQ HGELNCWRIS SDRAELLIAQ QGAQVLSYQQ VGEPPLLWLS DQAIFRQGKS
VRAGVPVCWP WFGNLQRNPE AVQAMYQGTP APAHGLARTR DWKLLGIKEV GETLRIEFEL
PEARGDLPGW PHDVELKLVV EMGADLTLSL TSRNMGNTPV TISQALHSYF AVSDVRQARV
EGVDGLGYIE TLAGWEQRQQ QGALTFAGET DRIYLNTPQT LSIVDPHWNR RITLTSSGSR
STVIWNPWTE RAKDLADMAD DGWQRMLCIE TANVWDDLVE LKPGASHSLG VQIGCENI
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