Gene Pput_5234 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPput_5234 
Symbol 
ID5194425 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas putida F1 
KingdomBacteria 
Replicon accessionNC_009512 
Strand
Start bp5876004 
End bp5876837 
Gene Length834 bp 
Protein Length277 aa 
Translation table11 
GC content59% 
IMG OID640589717 
Productphosphate transporter ATP-binding protein 
Protein accessionYP_001270536 
Protein GI148550434 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG1117] ABC-type phosphate transport system, ATPase component 
TIGRFAM ID[TIGR00972] phosphate ABC transporter, ATP-binding protein 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value0.634569 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones16 
Fosmid unclonability p-value0.16068 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCAGCAAG ATTCCCACAC CCATGGCATC GACATGTCTG CCCTGGGCCG CAACAAGCAA 
AGCCTGCGAA TGGCTGAAGA AACCGTGGCC ATCGAAGTGC CGGGCCTGAG CCTGTTCTAT
GGCGACAAGC AAGCGCTGTT CGACGTGCAG ATGAACATCC CGAAGCAGCG TGTGACCGCC
TTCATCGGCC CATCCGGCTG CGGCAAGTCG ACCCTGCTGC GCACTTTCAA CCGGATGAAC
GACCTGGTTG ACGGTTGCCG TGTGGAAGGT GCCATCAACC TGTACGGCAA CAACATCTAC
CGCAAGGGTG AAGACGTTGC CGAACTGCGC CGGCGTGTGG GCATGGTGTT CCAGAAGCCG
AACCCGTTCC CCAAGACCAT CTACGAGAAC GTGGTCTACG GCCTGCGCAT CCAGGGCATC
AACAAGAAGC GCGTGCTTGA TGAAGCCGTC GAGTGGGCGT TGAAGGGCGC GGCCTTGTGG
GACGAGGTCA AGGACCGCCT GCACGAGTCG GCGCTGGGCC TGTCCGGTGG CCAGCAGCAG
CGTCTGGTCA TCGCCCGCAC CATTGCCGTG GAGCCGGAGG TGCTGCTGCT TGACGAACCG
TGCTCGGCGC TGGACCCGAT CTCGACCTTG AAGGTCGAAG AACTGATCTA TGAATTGAAA
TCCAAGTACA CCATCGTCAT CGTGACCCAC AACATGCAGC AAGCGGCGCG TGTTTCGGAT
TACACCGCGT TCATGTACAT GGGCAAACTG GTCGAATTCG GGGATACCGA TACCCTGTTC
ACCAACCCGG CGAAGAAGCA GACCGAAGAC TACATCACCG GTCGCTACGG CTAA
 
Protein sequence
MQQDSHTHGI DMSALGRNKQ SLRMAEETVA IEVPGLSLFY GDKQALFDVQ MNIPKQRVTA 
FIGPSGCGKS TLLRTFNRMN DLVDGCRVEG AINLYGNNIY RKGEDVAELR RRVGMVFQKP
NPFPKTIYEN VVYGLRIQGI NKKRVLDEAV EWALKGAALW DEVKDRLHES ALGLSGGQQQ
RLVIARTIAV EPEVLLLDEP CSALDPISTL KVEELIYELK SKYTIVIVTH NMQQAARVSD
YTAFMYMGKL VEFGDTDTLF TNPAKKQTED YITGRYG