| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pput_5231 |
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| Symbol | |
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| ID | 5192003 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida F1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009512 |
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| Strand | - |
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| Start bp | 5873041 |
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| End bp | 5873937 |
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| Gene Length | 897 bp |
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| Protein Length | 298 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 640589714 |
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| Product | peptidase M23B |
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| Protein accession | YP_001270533 |
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| Protein GI | 148550431 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0739] Membrane proteins related to metalloendopeptidases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 0.347786 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 15 |
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| Fosmid unclonability p-value | 0.103229 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCCCGCGC GCCTGCTGCT GTTCTGTGCA TTGCTCATGG CCTCGGCGTC GAGCCAGGGC
GTGACGCTCT ACAAGATCAC TGACGATTCC GGTGTCGTCT CCTATTCCGA CCGCCCTGGC
CCCGGCGCCA AGCCCTTGGT GTTGCTCGAG CCCATGGTCG AAACGCTCGA AGGCCAGGTA
CTGCTGAACG CGAAAACCTT CGACGGTGGC GTGAGCTTTT CGGCACGAAA CGAGCTGCAT
GTGCCGGTAG AGGTAGAGTT GCGGCTGGAC AACCTGGTCA ACGCACAAGG CGGTGATGCC
CCGCGTATCG TGCGCCGGCT GCTGCCGCCG CGCACCACGC AGATGCTCAG TGTGCTCAGG
GGGCGGCCCG GGCTGTTGCT GAACTACCGT TCGACCCTGC TGCAGGCCAT GGGTGATCCG
GGCAAACGGC CGCTAGGCTT CCGCTATGCG TTCCCGTGGA TTGGCGGGCC GTTCCGCGTC
ACTCAGGGCC CCAATGGCCG TGTCAGTCAT TTTGGGCCCC GAGGGCGCTA CGCCATGGAT
ATCGCCATGC CCGAAGGCAC ACCCATCATC GCGGCGCGGG AAGGGGTGGT GGTGAAGACG
CAGAACAGCC AGAGCGGGCG CGGCCCCAAC CCCTCGGGTA ACTTTGTCAG GATTTTGCAC
CCGGATGGCA CCATGGGCGT CTACCTTCAC CTGATGCGTG GTTCGGTGGT GGTGGCGGAG
GGGCAACGGG TACGGCAGGG CCAGATGCTG GCCAAGTCGG GCAATACCGG CAACAGCACT
GGGCCGCACC TGCATTTTGT GGTGCAGCGC AATGTGGGGT TGGCGCTGGA GTCGATACCA
TACCGCTTCG ACAGGCCGAT CAGCGGGATG CCGGATTTCA CTGCCGGCAA CCCTTGA
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| Protein sequence | MPARLLLFCA LLMASASSQG VTLYKITDDS GVVSYSDRPG PGAKPLVLLE PMVETLEGQV
LLNAKTFDGG VSFSARNELH VPVEVELRLD NLVNAQGGDA PRIVRRLLPP RTTQMLSVLR
GRPGLLLNYR STLLQAMGDP GKRPLGFRYA FPWIGGPFRV TQGPNGRVSH FGPRGRYAMD
IAMPEGTPII AAREGVVVKT QNSQSGRGPN PSGNFVRILH PDGTMGVYLH LMRGSVVVAE
GQRVRQGQML AKSGNTGNST GPHLHFVVQR NVGLALESIP YRFDRPISGM PDFTAGNP
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