| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pput_5230 |
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| Symbol | |
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| ID | 5192002 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida F1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009512 |
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| Strand | + |
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| Start bp | 5871580 |
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| End bp | 5872920 |
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| Gene Length | 1341 bp |
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| Protein Length | 446 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 640589713 |
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| Product | hypothetical protein |
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| Protein accession | YP_001270532 |
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| Protein GI | 148550430 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG1253] Hemolysins and related proteins containing CBS domains |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 23 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 15 |
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| Fosmid unclonability p-value | 0.126895 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGACCCTT CCTCTGGCAT TAGCCTCACC TCGTTATTCG CCGACTTCGG CATGATCATC
TTTGCCTTCC TGCTGGTGCT GCTCAACGGC TTCTTCGTTG CCGCGGAGTT CGCCATGGTC
AAGCTGCGCG CTACACGCGT AGAGGCCATC GCCGAAAAGC ACGGCTGGCG TGGCAACATC
CTGCGCAAGG TTCACAACCA GCTCGACGCC TACCTGTCGG CCTGCCAATT GGGCATCACC
CTCGCCTCGC TGGGCCTGGG CTGGGTGGGT GAGCCCGCCT TCGCCCACCT GCTGGAACCA
TTGCTGGCCT ATTTCGGCGT GGACAGCGCC GAGCTGGTCA AGGCGATCTC GTTCTTCGTC
GCCTTCTTCG TCATCTCGTA CCTGCACATC GTGGTCGGCG AGCTGGCCCC CAAGTCCTGG
GCTATCCGCA AGCCAGAGCT GCTGTCGCTG TGGACCGCCG TGCCGCTTTA CCTGTTCTAC
TGGGCGATGT ACCCGGCCAT TTACCTGCTC AATGCCAGCG CCAACACCAT CCTGCGCATT
GCCGGCCAGG GCGAGCCTGG CCCGCACCAC GAGCACCACT ACAGCCGCGA AGAACTTAAG
CTGATCCTGC ACTCCAGCCG TGGCCAGGAC CCAAGCGACC AAGGCATGCG CGTGCTGGCC
TCGGCCGTGG AAATGGGCGA GCTGGAAGTG GTCGACTGGG CCAACTCGCG TGAGGACATG
ATCAGCATCG ACGCCCATGC GCCTCTGAAG CAAATCCTGG CCCTGGTGCG CCGCCACAAG
TTCAGCCGCT ACCCGGTGTA CGACGCCGAG CGCGAAGAAT TCACCGGCCT GCTGCACATC
AAGGACCTGC TGCTGGAGCT GGCTGAGCTG GAGCACTTGC CAGAGACCAT CGACCTGGAG
GACCTTGCCC GGCCACTCGA ACGCGTGTCG CGGCACATGC CGTTGGCCCA GTTGCTGGAG
CAGTTCCGTA AGGGCGGCGC GCACTTCGTG CTGGTAGAGG AAGCCGATGG CAAGGTGATC
GGCTACCTGA CCATGGAAGA CGTGCTGGAA GTGCTGGTGG GCGACATCCA GGACGAGCAC
CGCAAGACCG AGCGTGGCAT TCTCGCCTAC CAGCCGGGCA AGCTGCTGGT GCGCGGCGAC
ACCCCACTGT TCAAGGTCGA ACGCCTGCTG GGTATCGACC TTGACCATAT CGAGGCGGAA
ACCCTGGCCG GGTTGATCTA CGAGACGCTC AAGCGCGTGC CTGAAGAAGA GGAAGTGCTG
GAAGTCGAAG GGCTGCGCAT CATCATCAAG AAGATGAAAG GGCCCAAGAT CGTACTGGCC
AAGGTGCTGA AGCTGGATTG A
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| Protein sequence | MDPSSGISLT SLFADFGMII FAFLLVLLNG FFVAAEFAMV KLRATRVEAI AEKHGWRGNI
LRKVHNQLDA YLSACQLGIT LASLGLGWVG EPAFAHLLEP LLAYFGVDSA ELVKAISFFV
AFFVISYLHI VVGELAPKSW AIRKPELLSL WTAVPLYLFY WAMYPAIYLL NASANTILRI
AGQGEPGPHH EHHYSREELK LILHSSRGQD PSDQGMRVLA SAVEMGELEV VDWANSREDM
ISIDAHAPLK QILALVRRHK FSRYPVYDAE REEFTGLLHI KDLLLELAEL EHLPETIDLE
DLARPLERVS RHMPLAQLLE QFRKGGAHFV LVEEADGKVI GYLTMEDVLE VLVGDIQDEH
RKTERGILAY QPGKLLVRGD TPLFKVERLL GIDLDHIEAE TLAGLIYETL KRVPEEEEVL
EVEGLRIIIK KMKGPKIVLA KVLKLD
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