Gene Pput_5222 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPput_5222 
Symbol 
ID5193781 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas putida F1 
KingdomBacteria 
Replicon accessionNC_009512 
Strand
Start bp5865204 
End bp5865503 
Gene Length300 bp 
Protein Length99 aa 
Translation table11 
GC content59% 
IMG OID640589705 
Producthistone family protein DNA-binding protein 
Protein accessionYP_001270524 
Protein GI148550422 
COG category[L] Replication, recombination and repair 
COG ID[COG0776] Bacterial nucleoid DNA-binding protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones30 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones20 
Fosmid unclonability p-value0.60947 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGCAAAC CAGAACTCGC CGCCGTCATC GCCGATAAGG CTGATCTGAC CAAGGAAAAG 
GCCAATCAGG TTTTGAACGC GATTCTCGAC AGCATCACCG GTGCCCTGGA CAAGGACACC
GTGACCCTGG TCGGTTTCGG CACCTTCGAA AAACGTCATC GCGGCGCGCG TACCGGCAAG
AACCCGCAAA CTGGGGAACC GGTCAAGATC AAGGCCAGCA ATACCGTGGC CTTCAAGCCT
GGCAAGAACC TGCGCGACAG CGTTAACGCC CCCGCCAAGC CAGCCAAGAA AGGCAAGTGA
 
Protein sequence
MRKPELAAVI ADKADLTKEK ANQVLNAILD SITGALDKDT VTLVGFGTFE KRHRGARTGK 
NPQTGEPVKI KASNTVAFKP GKNLRDSVNA PAKPAKKGK