| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pput_5220 |
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| Symbol | |
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| ID | 5193876 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida F1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009512 |
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| Strand | + |
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| Start bp | 5863148 |
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| End bp | 5864551 |
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| Gene Length | 1404 bp |
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| Protein Length | 467 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 640589703 |
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| Product | putative signal transduction protein |
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| Protein accession | YP_001270522 |
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| Protein GI | 148550420 |
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| COG category | [S] Function unknown
[T] Signal transduction mechanisms |
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| COG ID | [COG1639] Predicted signal transduction protein
[COG2606] Uncharacterized conserved protein |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 0.312002 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 20 |
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| Fosmid unclonability p-value | 0.743433 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACTGAAG TTGCCCTGGA CACCGCAACC CCACACGCCC CCTCCGTCAT CAGGCTGCTG
CTCGACAAGC TCGGCGTGCC CTACCGCCAG GTGGTCGAGC ACTCGCACCT GCCTGCGGCT
TCGCGGGTGC AGGCTGTCCT TCTCGACGAC GAGGTCGGCG CCCTCATGGT GCTGTTCCCG
CAGAGCCACC TGCTGGACCT CAACCGCCTG GCCGAGCTGA CCGGGCGCAA GCTGACCGCG
GTGTCGGTGC CGCGCCTGAA GCAGATGCTC GACAAGCACC ACCTCAAGGC CCTGCCGGGC
ATCCCGGCAC TGACCAGCTC GCCATGTCAG TACGAAAAGA GCCTGCTCGA CGCCGAAACT
GTCTTTATCC AGTCAGGCGA AGCCGGCCTG TTGCTGGAAA TCGAACGCGC ACACTTCAAG
CGCATGCTGG CCAAGGCCAG CGCCAGCAGC TTTGGCCAGC AAGTCGAAGC GATCAGCCCC
AATCTCGACC GCCCCGATGA CGACACCCGG GAAATCACCG ATGCGGTCCA GGCCTTCACT
GCCCGACGCA TTCAGAAACG CCTGGAAGAA ACCATCGAAA TTCCACCGCT CGCCGACACC
GCGCAGAAGA TCATCAAGCT GCGGGTAGAT CCCAACGCCA GCATCGACGA CATCACCGGC
GTGGTCGAAA CCGACCCGGC GCTGGCGGCG CAGGTGGTGA GCTGGGCTGC ATCGCCCTAC
TATGGATCAC CGGGCAAGAT CCGCTCGGTG GAAGACGCCA TCGTGCGTGT GCTGGGTTTC
GACCTGGTGA TCAACCTGGC CTTGGGCCTG GCGCTGGGCA AGACCTTGAG CCTGCCCAAA
GACCACCCGC AGCAGGCCAC GCCCTACTGG CAACAATCGA TCTACACCGC CGCGATCATC
GAAGGCCTGA CCCGCGCCAT GCCGCGCGCA GAACGCCCCG AGGCCGGGCT GACTTACCTG
GCCGGGCTAC TGCACAACTT TGGCTACCTG CTGCTGGCGC ACGTGTTCCC ACCGCATTTT
TCGCTGATTT GCCGCCACCT TGAGGTCAAC CCGCATTTGA ACCACACCTA TGTGGAACAA
CACTTGCTGG GCATCAGCCG CGAACAGATC GGTGCCTGGC TGATGAAGCT GTGGGACATG
CCAGAAGAGC TGTCGACTGC CTTGCGCTTT CAGCACGACC CAGCCTACGA CGGCGAATAT
TTCGCGTTCC CCAACTTGGT GTGCCTGGCC ACCCGCCTGC TGCGCTCGCG AGGTATAGGC
TCAGGGCCGC AGGAAGAGAT TCCTGACGAG CTGTTGGAAC GCCTGAGCAT TACCCGGGAC
AAGGCTGAGG ATGTGGTGAA CAAGGTGCTC GAAGCCGAGA ACCTGTTGCG TGAGCTGGCT
TCGCAGTTCC ATGCACCGCA TTAA
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| Protein sequence | MTEVALDTAT PHAPSVIRLL LDKLGVPYRQ VVEHSHLPAA SRVQAVLLDD EVGALMVLFP
QSHLLDLNRL AELTGRKLTA VSVPRLKQML DKHHLKALPG IPALTSSPCQ YEKSLLDAET
VFIQSGEAGL LLEIERAHFK RMLAKASASS FGQQVEAISP NLDRPDDDTR EITDAVQAFT
ARRIQKRLEE TIEIPPLADT AQKIIKLRVD PNASIDDITG VVETDPALAA QVVSWAASPY
YGSPGKIRSV EDAIVRVLGF DLVINLALGL ALGKTLSLPK DHPQQATPYW QQSIYTAAII
EGLTRAMPRA ERPEAGLTYL AGLLHNFGYL LLAHVFPPHF SLICRHLEVN PHLNHTYVEQ
HLLGISREQI GAWLMKLWDM PEELSTALRF QHDPAYDGEY FAFPNLVCLA TRLLRSRGIG
SGPQEEIPDE LLERLSITRD KAEDVVNKVL EAENLLRELA SQFHAPH
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