| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pput_5214 |
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| Symbol | |
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| ID | 5190982 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida F1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009512 |
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| Strand | - |
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| Start bp | 5856785 |
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| End bp | 5857642 |
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| Gene Length | 858 bp |
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| Protein Length | 285 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 640589697 |
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| Product | NAD-dependent epimerase/dehydratase |
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| Protein accession | YP_001270516 |
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| Protein GI | 148550414 |
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| COG category | [G] Carbohydrate transport and metabolism
[M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0451] Nucleoside-diphosphate-sugar epimerases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 36 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 18 |
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| Fosmid unclonability p-value | 0.304626 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCAGACC TTTCCGTGAT GGTGGTGGGT TGTGGTGATG TGGGTGGGCG TCTGGCCAAG
CAGATGTTGG CTAAAGGCTG GCAGGTGAGC GGCCTGCGCC GTTCTGTTGG TCAGCTGCCC
GCAGGGGTTC AGCCGGTTGC CGCAGATTTG GCCGAACCGT CGATACCGCA GTCCTGGCCA
CAGGGCCCGC TGGACTACCT GGTGTACTGC GTGGCGGCCA GCCAGCACGA TGAGGCGGGT
TACCAAGCAG CCTATGTCGA TGGTTTGCGC CATGTGTTGG CCTGGTTGGC CGAGCGTGGC
CAGCGCCCGC GTCGGCTGCT GTTCATCTCA AGCAGCAGTG TGTATGCGCA GAAAGGCGGC
GAGTGGATAG AGGAGGGCGC TGCCACCGAG CCTGAGGGCT ATTCCGGGCG TGTGATGCTG
GAGGCTGAAC GGTTGGCACT GGCCAGCGGG ATCCCGGCGA GCGTGGTCCG CCTGACCGGT
ATCTATGGCC CAGGGCGTGA GTGGTTGCTG AGCCAGGTGC GTCAGGGTTA CCGCGTTGCC
GAGGAGCCAC CGCTGTATGG CAATCGCATT CATGCCGAAG ATGCCGCCAG CCTGCTGGCG
TTTCTGCTGC AGGCCGATGC TGATGGCAAG GCTCTGGACG ACTGCTACAT TGGCGTCGAT
GACGACCCGG CGCCGCTGGC CGATGTGGTG GCCTGGCTAC GGGCGTACAT GGGGGTTACC
GAATGGTCCG ATGAGCAGCG GGTGCGGCGT ACTGGCAGCA AGCGCTGCAG CAATGCCCGG
GCGCGGGCGC TCGGCTGGGC GCCTGAGTAT CCGAGCTACA AGGAAGGCTA CGCCGCGATC
CTGGCAGGAA AAGCCTAG
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| Protein sequence | MSDLSVMVVG CGDVGGRLAK QMLAKGWQVS GLRRSVGQLP AGVQPVAADL AEPSIPQSWP
QGPLDYLVYC VAASQHDEAG YQAAYVDGLR HVLAWLAERG QRPRRLLFIS SSSVYAQKGG
EWIEEGAATE PEGYSGRVML EAERLALASG IPASVVRLTG IYGPGREWLL SQVRQGYRVA
EEPPLYGNRI HAEDAASLLA FLLQADADGK ALDDCYIGVD DDPAPLADVV AWLRAYMGVT
EWSDEQRVRR TGSKRCSNAR ARALGWAPEY PSYKEGYAAI LAGKA
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