Gene Pput_5207 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPput_5207 
Symbol 
ID5193495 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas putida F1 
KingdomBacteria 
Replicon accessionNC_009512 
Strand
Start bp5849519 
End bp5850286 
Gene Length768 bp 
Protein Length255 aa 
Translation table11 
GC content65% 
IMG OID640589690 
Productpeptidase C26 
Protein accessionYP_001270509 
Protein GI148550407 
COG category[R] General function prediction only 
COG ID[COG2071] Predicted glutamine amidotransferases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value0.639045 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones19 
Fosmid unclonability p-value0.381902 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCGCAA ATGCGGTCCC TTTGATCGGT GTCAGCGCCT GCCGTCAGCA GGTAGGGAAG 
AACTCCTCGC ACACGGTCGG CGACAAGTAT GTCGAGGCAG CCGGCTTTGC CGGCTTGCCA
CTGATCTTGC CGGCCCGTGA TGGCGGCAGC GACACGCAAG CGCTGCTGGC CCGCCTGCAC
GGCATTGTTT TTACCGGCTC GCCTTCAAAT ATCGAGCCGC ATCATTACAA TGGCGCCCCC
AGTGTGGCGG GTACCCGGCA TGATCTGGCG CGTGATCGCC TGACCCTGCC GCTGCTGCAG
GCAGCCATTG CCGTCGGTGT GCCCGTATTC TGCATCTGCC GAGGCTACCA GGAGCTGAAC
GTGGCCCTTG GCGGCAGCCT GCACCAGCGT GTGCAGGAGC TGCCAGGCTA CCTTGACCAC
CGCGAACCCG AGGATGCCCC CCTGGAGGTG CAATACAGCC CTCGTCACTC GGTCAGTATC
GAGCCTGGCG GGTTGTTCGA GCGCCTGGGC CTGGCGGCGC AGTTCGAGGT CAATTCGCTG
CACAGCCAGG GCATCGACCG TCTGGCCCCA GGCCTGCGCG TCGAGGCACG GGCCCCGGAT
GGCCTGATCG AGGCGGTGTC CATGCCTGCG GCACCGGGCT TTGTGCTCGG GGTGCAGTGG
CACCCGGAGT GGCGCTTCAA CGAAAACCCG GTTTCGCTGC GTCTGTTTCA GGCGTTTCGC
GAGGCCTGCA ATGCCTACGC AGCACGGGAG GGCTCACGGC AGGAATGA
 
Protein sequence
MSANAVPLIG VSACRQQVGK NSSHTVGDKY VEAAGFAGLP LILPARDGGS DTQALLARLH 
GIVFTGSPSN IEPHHYNGAP SVAGTRHDLA RDRLTLPLLQ AAIAVGVPVF CICRGYQELN
VALGGSLHQR VQELPGYLDH REPEDAPLEV QYSPRHSVSI EPGGLFERLG LAAQFEVNSL
HSQGIDRLAP GLRVEARAPD GLIEAVSMPA APGFVLGVQW HPEWRFNENP VSLRLFQAFR
EACNAYAARE GSRQE