Gene Pput_5201 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPput_5201 
Symbol 
ID5190779 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas putida F1 
KingdomBacteria 
Replicon accessionNC_009512 
Strand
Start bp5844489 
End bp5844857 
Gene Length369 bp 
Protein Length122 aa 
Translation table11 
GC content58% 
IMG OID640589684 
Producthypothetical protein 
Protein accessionYP_001270503 
Protein GI148550401 
COG category[S] Function unknown 
COG ID[COG3296] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value0.402389 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones19 
Fosmid unclonability p-value0.38056 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCGATT CGAACCTGTC GATCACCCCG CCCAATGCCG AAATCCGGCA ATGGGCGATG 
TTCTGCCACC TCTCCGCGCT GTTGGGCCTG GTAGTGCCGC TCGGGCACCT GCTGGGCCCG
CTGGTGCTAT GGCACCTCAA GCGCGAGCAA GACCCTTTTA TCGACGCCCA GGGCAAAGAG
GCGCTGAACT TTCAAATCAG CGTGACCATT GCCGGGTTCA TCTGCTTTCT GCTGATGTTC
GTGTTTATCG GGCTGGTGCT GTTTGCCATG CTCACGGTGG CAGTGATGAT ATTGATCATC
ATTGCGGCGG TGCGGGCGAA TGAGGGCAAG CCTTATCGCT ACCCGATGAT CTGGCGGCCG
ATCAAATAG
 
Protein sequence
MSDSNLSITP PNAEIRQWAM FCHLSALLGL VVPLGHLLGP LVLWHLKREQ DPFIDAQGKE 
ALNFQISVTI AGFICFLLMF VFIGLVLFAM LTVAVMILII IAAVRANEGK PYRYPMIWRP
IK