| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pput_5199 |
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| Symbol | pyrE |
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| ID | 5192473 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida F1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009512 |
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| Strand | - |
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| Start bp | 5842954 |
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| End bp | 5843595 |
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| Gene Length | 642 bp |
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| Protein Length | 213 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 640589682 |
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| Product | orotate phosphoribosyltransferase |
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| Protein accession | YP_001270501 |
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| Protein GI | 148550399 |
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| COG category | [F] Nucleotide transport and metabolism |
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| COG ID | [COG0461] Orotate phosphoribosyltransferase |
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| TIGRFAM ID | [TIGR00336] orotate phosphoribosyltransferase |
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Plasmid Coverage information |
| Num covering plasmid clones | 23 |
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| Plasmid unclonability p-value | 0.613466 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 19 |
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| Fosmid unclonability p-value | 0.426629 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGCAGCCGT ATCAGCGCGA CTTTATCCGT TTTGCCATCG ATCGCGGGGT ACTGCGTTTC
GGTGAATTCA CCCTGAAATC GGGGCGTACC AGCCCGTATT TCTTCAATGC CGGCCTGTTC
AACACCGGTT CCGCCCTGGC TGAACTGGGC CGTTGCTACG CCGCCGCCAT CGTCGACAGC
AAGATCCCGT TCGATGTGCT GTTCGGCCCG GCCTACAAGG GTATCCCTTT GGCGGCGACT
ACCGCCGTGG CCCTTGCCGA CCAGCATCAG CTGGACGTGC CATGGTGCTT CAACCGCAAG
GAAGCCAAGG ACCATGGCGA AGGTGGCAGC CTGGTCGGCG CGCCGCTGGC CGGTGACGTG
CTGATCATCG ACGACGTGAT TACTGCCGGT ACCGCCATTC GTGAGGTCAT GCAGATCATC
AACGCCCAGC AGGCCAAGGC CGCTGGTGTA CTGATCGCGC TGAACCGTGA AGAGCGCGGC
AATGGCGAAC TGTCGGCGAT CCAGGAAGTG GAACGCGACT TCGGTATCCC GGTGGTCAGC
ATTGTTTCGC TGACCCAGGT GCTGGAGTTC CTGGCTGACG ATCCACAGCT GAAACAGCAT
CTGCCGGCTG TCGAGGCCTA CCGGGCGCAG TACGGGATCT GA
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| Protein sequence | MQPYQRDFIR FAIDRGVLRF GEFTLKSGRT SPYFFNAGLF NTGSALAELG RCYAAAIVDS
KIPFDVLFGP AYKGIPLAAT TAVALADQHQ LDVPWCFNRK EAKDHGEGGS LVGAPLAGDV
LIIDDVITAG TAIREVMQII NAQQAKAAGV LIALNREERG NGELSAIQEV ERDFGIPVVS
IVSLTQVLEF LADDPQLKQH LPAVEAYRAQ YGI
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