| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pput_5188 |
|---|
| Symbol | |
|---|
| ID | 5190262 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pseudomonas putida F1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009512 |
|---|
| Strand | - |
|---|
| Start bp | 5832974 |
|---|
| End bp | 5834554 |
|---|
| Gene Length | 1581 bp |
|---|
| Protein Length | 526 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 63% |
|---|
| IMG OID | 640589671 |
|---|
| Product | aldehyde dehydrogenase |
|---|
| Protein accession | YP_001270490 |
|---|
| Protein GI | 148550388 |
|---|
| COG category | [C] Energy production and conversion |
|---|
| COG ID | [COG1012] NAD-dependent aldehyde dehydrogenases |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 18 |
|---|
| Plasmid unclonability p-value | 0.536573 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 14 |
|---|
| Fosmid unclonability p-value | 0.0718586 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGTGCGCGT GGCGCCCGGC CAGAATTCTG ACAACGCCTG TGAGTCCTCA GTGCGGCGTT
GCACCTAAAC AAGAGGAGGA GTTTCGTATG ACCACCCTGA CCCGTGCGGA CTGGGAACAA
CGTGCCCAGC AACTGAAGAT CGAAGGCCGT GCCTTCATCA ACGGCGAATA CACCGATGCC
GCATCCGGTG AAACCTTCGA GTGCCTGAGC CCGGTCGACG GACGCTTCCT GGCCAAGGTT
GCCAGCTGCG ACCTGGCCGA TGCCAACCGC GCTGTTGAAA ACGCCCGTGC CACCTTCAAC
TCCGGCGTGT GGTCGCAGCT GGCCCCGGCC AAGCGCAAGG CCAAGCTGAT CCGTTTCGCC
GACCTGCTGC GCAAGAACGT CGAAGAGCTG GCGCTGCTGG AAACGCTGGA CATGGGCAAG
CCGATTGGCG ACTCCTCCAG TATCGACATC CCAGGTGCGG CCCAAGCCAT CCACTGGACT
GCCGAAGCCA TCGACAAGGT CTACGACGAA GTTGCCCCGA CCCCGCATGA TCAGCTTGGC
CTGGTTACTC GCGAGCCGGT AGGTGTGGTC GGTGCCATCG TACCTTGGAA CTTCCCGCTG
CTGATGGCCT GCTGGAAGCT CGGCCCGGCG TTGGCCACCG GTAACTCGGT CGTGCTCAAG
CCGTCCGAAA AATCGCCGCT GACTGCCATC CGCATCGCCC AACTGGCGAT CGAAGCCGGT
ATCCCGGCTG GCGTGCTGAA CGTGCTGCCA GGCTATGGCC ACACCGTGGG CAAGGCACTG
GCCCTGCACA TGGACGTCGA TACCCTGGTG TTCACCGGTT CGACCAAGAT CGCCAAGCAG
CTGATGGTTT ACGCGGGCGA GTCGAACATG AAGCGCATCT GGCTGGAAGC CGGTGGCAAG
AGCCCGAACA TCGTCTTTGC CGATGCCCCG GACCTGCAAG CTGCCGCCGA AGCCGCCGCC
AGCGCCATCG CCTTCAACCA GGGCGAAGTG TGCACTGCAG GTTCCCGACT GCTGGTCGAG
CGTTCGATCA AGGACAAGTT CCTGCCGATG GTGGTAGAAG CCCTGAAAGG CTGGAAGCCA
GGCAACCCGC TGGACCCGCA GACCACTGTC GGTGCCTTGG TCGATACCCA GCAGATGAAC
ACCGTGCTGT CGTACATCGA GGCTGGCCAC AAGGACGGCG CCAAGCTGCT GGCCGGCGGC
AAGCGCACCC TGGAAGAGAC CGGCGGCACC TACGTCGAGC CGACCATCTT CGACGGCGTG
ACTAACGCCA TGCGCATTGC CCAGGAAGAA ATCTTCGGCC CGGTGCTGTC GGTGATTGCC
TTCGACACCG CCGAAGAAGC CGTGGCCATT GCCAACGACA CCCCGTATGG CCTGGCAGCG
GGTATCTGGA CCTCGGACAT TTCCAAGGCC CACAAGACCG CCCGTGCCGT GCGTGCGGGC
AGCGTCTGGG TCAACCAGTA CGATGGTGGC GACATGACCG CGCCGTTCGG TGGCTTCAAA
CAGTCGGGCA ACGGCCGTGA CAAGTCGCTG CACGCACTGG AGAAGTACAC CGAGCTGAAG
GCGACCTGGA TCAAGCTGTA A
|
|---|
| Protein sequence | MCAWRPARIL TTPVSPQCGV APKQEEEFRM TTLTRADWEQ RAQQLKIEGR AFINGEYTDA
ASGETFECLS PVDGRFLAKV ASCDLADANR AVENARATFN SGVWSQLAPA KRKAKLIRFA
DLLRKNVEEL ALLETLDMGK PIGDSSSIDI PGAAQAIHWT AEAIDKVYDE VAPTPHDQLG
LVTREPVGVV GAIVPWNFPL LMACWKLGPA LATGNSVVLK PSEKSPLTAI RIAQLAIEAG
IPAGVLNVLP GYGHTVGKAL ALHMDVDTLV FTGSTKIAKQ LMVYAGESNM KRIWLEAGGK
SPNIVFADAP DLQAAAEAAA SAIAFNQGEV CTAGSRLLVE RSIKDKFLPM VVEALKGWKP
GNPLDPQTTV GALVDTQQMN TVLSYIEAGH KDGAKLLAGG KRTLEETGGT YVEPTIFDGV
TNAMRIAQEE IFGPVLSVIA FDTAEEAVAI ANDTPYGLAA GIWTSDISKA HKTARAVRAG
SVWVNQYDGG DMTAPFGGFK QSGNGRDKSL HALEKYTELK ATWIKL
|
|---|
| |