| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pput_5180 |
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| Symbol | |
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| ID | 5194797 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida F1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009512 |
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| Strand | - |
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| Start bp | 5824291 |
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| End bp | 5825595 |
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| Gene Length | 1305 bp |
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| Protein Length | 434 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 640589663 |
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| Product | D-amino acid dehydrogenase small subunit |
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| Protein accession | YP_001270482 |
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| Protein GI | 148550380 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0665] Glycine/D-amino acid oxidases (deaminating) |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 23 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 14 |
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| Fosmid unclonability p-value | 0.0763537 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCGAGTTC TGGTACTTGG TAGCGGTGTA ATCGGAACCG CCAGTGCCTA CTACCTGGCC
CGGCAAGGTT TCGAAGTCAC GGTGGTCGAC CGCCAGCCGG CGGTGGCCAT GGAAACCAGC
TTTGCCAACG CCGGCCAGAT CTCGCCCGGC TATGCCTCGC CCTGGGCTGC CCCTGGTGTA
CCGCTCAAAG CCATCAAATG GCTACTGGAG CGTCACGCCC CCTTGGCCAT CAAGCTCACG
GGCGACGTCG ACCAGTACCT GTGGATGGCA CAGATGCTGC GCAACTGCAC CGCCAGCCGC
TACGCGGTGA ACAAGGAGCG TATGGTGCGT CTGTCCGAGT ACAGCCGTGA CTGCCTCGAC
GAGCTGCGCG CCGAAACCGG CATCAACTAC GAAAACCGCA GCCTGGGCAC CACCCAGCTG
TTCCGCACCC AGGCCCAGGT CGATGCTGCG GCCAAGGACA TTGCCGTACT CGAACAGTCC
GGTGTGCCTT ACGAGCTGCT CGACCGCGAC GGCATTGCCC GCGTCGAACC CGCCCTGGCC
GGCGTGAAAG ATATCCTGGC CGGCGCCCTG CGTTTGCCGA ACGACCAGAC TGGCGACTGC
CAGCTGTTCA CCACCAAGCT CGCCGACATG GCGTTGAAGC TGGGCGTGGA GTTCCGCTTC
GGCCAGGACA TCCAGCGCCT GGACTTCGCC GGTGACCGCA TCAATGGCGT GTGGATCGAC
GGCAAGCTGG AGACGGCAGA CCGCTACGTG CTGGCGCTGG GCAGCTACTC GCCACAGATG
CTCAAGCCGC TGGGCATCAA GGCTCCGGTG TACCCGCTGA AAGGTTATTC GCTGACCGTG
CCGATCACCA ACGCCGACAT GGCTCCGACC TCGACCATTC TCGACGAGAC CTATAAGGTT
GCGATCACCC GTTTCGATAA CCGCATCCGC GTTGGCGGGA TGGCTGAAAT CGCCGGCTTT
GACCTGTCGC TGAACCCGCG CCGGCGCGAA ACACTGGAGA TGATCGTCAA CGACCTTTAT
CCTCGCGGCG GTGACTTGAG CCAGGCCAGC TTCTGGACCG GCCTGCGCCC GGCGACCCCG
GACGGCACGC CGATCGTGGG TGCCACGGGG TTCCGCAACC TGTTCCTGAA CACCGGTCAC
GGTACCTTGG GCTGGACCAT GGCGTGCGGT TCCGGTCGCT TGCTGGCCGA CCTGATTGCG
CGCAAGAAGC CGCAGATCAG TGCCGAAGGC CTGGATATCT CCCGGTATGG CAACAGCCGG
GAAGTGGCCA AGCACGGGCA AAGCGCGCCG GCTCACCAGC AGTAA
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| Protein sequence | MRVLVLGSGV IGTASAYYLA RQGFEVTVVD RQPAVAMETS FANAGQISPG YASPWAAPGV
PLKAIKWLLE RHAPLAIKLT GDVDQYLWMA QMLRNCTASR YAVNKERMVR LSEYSRDCLD
ELRAETGINY ENRSLGTTQL FRTQAQVDAA AKDIAVLEQS GVPYELLDRD GIARVEPALA
GVKDILAGAL RLPNDQTGDC QLFTTKLADM ALKLGVEFRF GQDIQRLDFA GDRINGVWID
GKLETADRYV LALGSYSPQM LKPLGIKAPV YPLKGYSLTV PITNADMAPT STILDETYKV
AITRFDNRIR VGGMAEIAGF DLSLNPRRRE TLEMIVNDLY PRGGDLSQAS FWTGLRPATP
DGTPIVGATG FRNLFLNTGH GTLGWTMACG SGRLLADLIA RKKPQISAEG LDISRYGNSR
EVAKHGQSAP AHQQ
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