| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pput_5179 |
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| Symbol | dadX |
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| ID | 5194689 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida F1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009512 |
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| Strand | - |
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| Start bp | 5823073 |
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| End bp | 5824146 |
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| Gene Length | 1074 bp |
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| Protein Length | 357 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 640589662 |
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| Product | alanine racemase |
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| Protein accession | YP_001270481 |
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| Protein GI | 148550379 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0787] Alanine racemase |
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| TIGRFAM ID | [TIGR00492] alanine racemase |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 0.265512 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 17 |
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| Fosmid unclonability p-value | 0.266317 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCGTCCCG CCCGCGCCCT GATCGACCTC CAGGCCCTGC GCCACAACTA CCGTCTGGCC
CGTGAACTGA CCGGTGCCAA AGCCCTCGCC GTGATCAAGG CCGACGCCTA TGGCCACGGC
GCCGTGCGCT GTGCCCTGGC CTTGGAGGCC GAGGCCGACG GGTTTGCGGT GGCCTGCATC
GAGGAGGCAC TGGAACTGCG CGCCGCGGGT ATCAATGCCC CGGTGTTGCT GCTGGAAGGT
TTTTTCGAAG CCAGCGAACT GGCACTGATC GCCGAGCACG ACCTGTGGTG CGTGGTGCAC
TCGCTGTGGC AGCTGGAAGC CATCGAGAAA ACCCCGCTGC ACAAGCCGCT CACCGTCTGG
CTGAAGCTGG ACAGTGGCAT GCACCGCGTT GGCCTGCACC CCAAGGACTA CCACGATGCC
TACCAGCGAC TGCTGGCCAG TGGCAAGGTT TCGCGCATCG TGTTGATGAG CCACTTCGCT
CGCGCCGACG AACTGGACGC TGACGCTACC GCCCAGCAAA TTGCCGTGTT CGAAGCTGCC
CGACAGGGCC TGGCCGCCGA ATGCAGCCTG CGTAACTCAC CCGGCGTGCT GGGCTGGCCG
CAAGCGCCCA GCGACTGGGT ACGCCCAGGC CTGATGCTGT ACGGCGCCAC GCCGTTCGAA
GTGGCGCAGG CCGAGGCCGC ACGCCTGCAA CCGGTGATGA CCCTGCAATC GCGGGTGATC
AGCGTGCGCG AGCTGCCTGC CGGCGAGCCG GTGGGCTATG GTGCCAAGTT CGTCAGCTCT
CGGCCGACCC GCGTGGGTGT GGTCGCCATG GGCTATGCCG ATGGCTACCC GCGCCAGGCG
CCCAACGGCA CCCCAGTGCT GGTCGCCGGC AAGCGTACCC ACCTGATCGG CCGGGTGTCG
ATGGACATGC TCAGCATCGA CCTCACCGAC GTCCCGCAAG CCACTGTCGG CAGCCCGGTC
GAACTCTGGG GCAAGCAGGT GCTGGCCAGT GAAGTGGCCG CGCAGGCGGG CACCATTCCG
TACCAGATCT TCTGCAACCT GAAGCGAGTA CCACGGGACT ACGTCGGCGA ATGA
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| Protein sequence | MRPARALIDL QALRHNYRLA RELTGAKALA VIKADAYGHG AVRCALALEA EADGFAVACI
EEALELRAAG INAPVLLLEG FFEASELALI AEHDLWCVVH SLWQLEAIEK TPLHKPLTVW
LKLDSGMHRV GLHPKDYHDA YQRLLASGKV SRIVLMSHFA RADELDADAT AQQIAVFEAA
RQGLAAECSL RNSPGVLGWP QAPSDWVRPG LMLYGATPFE VAQAEAARLQ PVMTLQSRVI
SVRELPAGEP VGYGAKFVSS RPTRVGVVAM GYADGYPRQA PNGTPVLVAG KRTHLIGRVS
MDMLSIDLTD VPQATVGSPV ELWGKQVLAS EVAAQAGTIP YQIFCNLKRV PRDYVGE
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