| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pput_5178 |
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| Symbol | |
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| ID | 5194688 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida F1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009512 |
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| Strand | - |
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| Start bp | 5822417 |
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| End bp | 5823016 |
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| Gene Length | 600 bp |
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| Protein Length | 199 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 640589661 |
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| Product | XRE family transcriptional regulator |
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| Protein accession | YP_001270480 |
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| Protein GI | 148550378 |
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| COG category | [K] Transcription |
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| COG ID | [COG1396] Predicted transcriptional regulators |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 0.174471 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 16 |
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| Fosmid unclonability p-value | 0.155373 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGATATCGT TCACATCCAC TCCCCTTTCA CCGTTTCAGG AGGCTCCAGC TTTGGACGTC
GGCGAACGAC TGCAAGCCAT CCGCAAGCTC AAGGGCCTGT CGCAGCGCGA ACTCGCCAAG
CGTGCTGGCG TGACCAACAG CACCATCTCG ATGATCGAGA AGAACAGCGT AAGCCCCTCT
ATCAGCTCGC TGCGCAAGGT GCTGAGCGGC ATTCCCATGT CCATGGTCGA ATTCTTTTCG
GTCGAGCTGG AGCCGCAAAG CCCGACTCAG ATCGTCTACA AGGCCCACGA GCTGATCGAT
ATCTCGGACG GTGCGGTGAC CATGAAGCTG GTGGGCAAGT CGCACCCCAA CCGTGCCATC
GCTTTTCTGA CCGAGGTGTA CCCGCCAGGT GCGGACACCG GTGCCGAGAT GCTGACCCAC
GACGGCGAGG AGACCGGTAT CCTGCTTGAA GGCCGCCTGG AACTGGTGGT CGGCAACGAG
ATTTTCGTTC TCGAAGAAGG CGACAGCTAC TACTTCGAAA GCACCCGCCC GCACCGCTTC
CGCAACCCAT TCGACCAGCC GGCGCGGCTG ATCAGTGCGG CGACGCCTTC AAACTTTTGA
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| Protein sequence | MISFTSTPLS PFQEAPALDV GERLQAIRKL KGLSQRELAK RAGVTNSTIS MIEKNSVSPS
ISSLRKVLSG IPMSMVEFFS VELEPQSPTQ IVYKAHELID ISDGAVTMKL VGKSHPNRAI
AFLTEVYPPG ADTGAEMLTH DGEETGILLE GRLELVVGNE IFVLEEGDSY YFESTRPHRF
RNPFDQPARL ISAATPSNF
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