| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pput_5174 |
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| Symbol | |
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| ID | 5194098 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida F1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009512 |
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| Strand | + |
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| Start bp | 5817014 |
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| End bp | 5819023 |
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| Gene Length | 2010 bp |
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| Protein Length | 669 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 640589657 |
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| Product | ATP-dependent DNA helicase Rep |
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| Protein accession | YP_001270476 |
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| Protein GI | 148550374 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0210] Superfamily I DNA and RNA helicases |
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| TIGRFAM ID | [TIGR01074] ATP-dependent DNA helicase Rep |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 14 |
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| Fosmid unclonability p-value | 0.0902161 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCCCGAC TCAATCCCCG GCAGCAGGAA GCCCGTGACT ATGTCGGCGG CCCTCTTTTG
GTGCTCGCCG GTGCAGGTTC GGGCAAGACC AGCGTAATCA CGCGCAAGAT TGCCCACCTC
ATCCAGAACT GCGGCATCCG CGCCCAGTAC ATCGTGGCGA TGACCTTCAC CAACAAGGCC
GCGCGCGAGA TGAAGGAGCG GGTCGCCACC TTGCTGCGCC CGGGGGAAGG CCGTGGCCTG
ACCGTGTGTA CGTTCCACAA CCTGGGCCTG AACATCATCC GCAAGGAACA CGAGCGCCTG
GGCTACAAGC CGGGTTTCTC GATCTTCGAC GAGTCCGACA TCAAGGCGTT GCTGTCGGAC
ATCATGCAGA AGGAATACTC CGGCGACGAC GGCATCGACG AGATCAAGAA CATGATCGGT
GCCTGGAAGA ACGACCTGGT CCTGCCGCCA GAAGCCCTGG AAAAGGCGCG CAACCCGCGC
GAGCAGACCG CCGCCATCGT CTACACCCAC TATCAGCGCA CGCTCAAGGC GTTCAACGCG
GTGGACTTCG ACGACCTGAT CCTGCAGCCG GTCAAGCTGT TCCAGGAGCA CCCCGAGGTG
CTGGAGCGCT GGCAGAACCG CGTGCGTTAC CTGCTGGTGG ACGAATACCA GGACACCAAC
GCCAGCCAGT ACCTGCTGGT GAAAATGCTG ATCGGCATGC GCAACCAGTT CACCGTGGTG
GGCGACGACG ACCAGTCGAT CTACGCCTGG CGTGGTGCAC GCCCCGAGAA CCTGATGCTG
CTCAAGGAGG ACTACCCCTC CCTGAAGATC GTCATGCTCG AGCAGAACTA CCGCTCCACC
AGCCGCATCC TGCGCTGCGC CAACGTGTTG ATCGCCAACA ATCCGCATGC GTTCGAAAAG
CAGCTGTGGA GCGAAATGGG CGTGGGCGAC GAGATCCGCG TGATCCGCTG CAAGAACGAG
GAAGCCGAGG CCGAACGCGT GGCCATGGAA ATCCTCACCT TGCACCTGCG CACCAACCGC
CCGTACAGCG ACTTTGCCAT CCTTTACCGC GGCAACTACC AGGCCAAGCT GATCGAACTG
AAGCTGCAGC ACCACCAGGT GCCGTATCGC CTGTCGGGCG GTAACAGCTT CTTCGGCCGC
CAGGAGGTCA AGGACCTGAT GGCCTACCTG CGCCTGCTGG TGAACCCGGA CGATGACAAC
GCCTATCTGC GGGTAATCAA CGTGCCGCGC CGCGAGATCG GCTCCACCAC CCTGGAAAAG
CTCGGCAACT ACGCCACCGA GCGCGGCATT TCGATGTACG CCGCCAGCGA AGAGCTGGGC
CTGGGCGAGC ACCTGGACGC GCGCTACACC GAGCGCTTGC AGCGTTTCAA GCACTGGCTG
GACGGGGTGC GCCACAAGGT TGCCCTGGAA GACCCGATTG CCGCACTGCA CGAGATGATC
CGCGACATCG ACTACGAAAA CTGGATCCGC CAGCAGACCG CCAGCGACAA AGCTGCCGAG
TTCCGCATCA GCAACGTCTG GTTCCTGGTC GAAGCGCTGA AGAACACCCT CGAGAAGGAC
GAAGAGGGTG ACATGACCAT CGAGGACGCC ATCGGCAAGC TGGTGCTGCG CGACATGCTC
GAGCGCCAGC AGGAAGAAGA AGAGAACGCC GAAGGTGTGC AGATGATGAC CCTGCATGCC
TCAAAGGGCC TGGAATTCCC CTACGTGTTC ATCATGGGCA TGGAAGAGGA AATCCTCCCG
CACCGCTCCA GCATCGAGGC CGACACCATC GAAGAGGAAC GCCGCCTGGC CTACGTGGGC
ATCACCCGCG CGCGCCAGAC CCTGGCCTTC ACCTTCGCTG CCAAGCGCAA ACAGTACGGT
GAAATCATCG ACTGCACGCC CAGCCGGTTC CTCGACGAAC TGCCGCCGGA CGACCTGGCC
TGGGAGGGCC TCGACGATGC ACCGGTCGAG GTGAAGGCCG CTCGCGGCAA CAACGCCCTG
GCCGATATCC GGGCAATGCT CAAACGCTGA
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| Protein sequence | MSRLNPRQQE ARDYVGGPLL VLAGAGSGKT SVITRKIAHL IQNCGIRAQY IVAMTFTNKA
AREMKERVAT LLRPGEGRGL TVCTFHNLGL NIIRKEHERL GYKPGFSIFD ESDIKALLSD
IMQKEYSGDD GIDEIKNMIG AWKNDLVLPP EALEKARNPR EQTAAIVYTH YQRTLKAFNA
VDFDDLILQP VKLFQEHPEV LERWQNRVRY LLVDEYQDTN ASQYLLVKML IGMRNQFTVV
GDDDQSIYAW RGARPENLML LKEDYPSLKI VMLEQNYRST SRILRCANVL IANNPHAFEK
QLWSEMGVGD EIRVIRCKNE EAEAERVAME ILTLHLRTNR PYSDFAILYR GNYQAKLIEL
KLQHHQVPYR LSGGNSFFGR QEVKDLMAYL RLLVNPDDDN AYLRVINVPR REIGSTTLEK
LGNYATERGI SMYAASEELG LGEHLDARYT ERLQRFKHWL DGVRHKVALE DPIAALHEMI
RDIDYENWIR QQTASDKAAE FRISNVWFLV EALKNTLEKD EEGDMTIEDA IGKLVLRDML
ERQQEEEENA EGVQMMTLHA SKGLEFPYVF IMGMEEEILP HRSSIEADTI EEERRLAYVG
ITRARQTLAF TFAAKRKQYG EIIDCTPSRF LDELPPDDLA WEGLDDAPVE VKAARGNNAL
ADIRAMLKR
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